Laribacter hongkongensis: LHK_02922
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Entry
LHK_02922 CDS
T00884
Name
(GenBank) probable ABC transporter, ATP-binding/permease fusion
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
lhk
Laribacter hongkongensis
Pathway
lhk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LHK_02922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lhk02000
]
LHK_02922
02044 Secretion system [BR:
lhk02044
]
LHK_02922
Transporters [BR:
lhk02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LHK_02922
Secretion system [BR:
lhk02044
]
Type I secretion system
Adhesin protein transporter
LHK_02922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_29
DehI
Motif
Other DBs
NCBI-ProteinID:
ACO75900
UniProt:
C1D4V9
LinkDB
All DBs
Position
complement(2831654..2833819)
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AA seq
721 aa
AA seq
DB search
MDSSTAPDPGAQFSRQSTHVDPLLDCLFSLARAYGIATTREALVAGIPLVEHRLTPSMFA
RSARRIGLVSRVVRQPLTSLRADLLPAVLLLKDNEACILRGIEGDMAQISYPELPDSTVD
MPLDTLMANHLGLSIFVKPRFSFERRAPELAEIRSRHWFWGTVYSSWPLYRDALVAALLI
NLFALVTPIVTMNVYDRVVPNMATDTLWVLTSGAALVLLFDFMLKVTRGYLVDLASKRID
VTLSALIMERVLGVRMEARPASVGAFAANLRAFETVRDFIASASITGLIDLPFALIFILA
IGWVSPWMMLPVVAGGVLMLGFAWLVQEKMQELTETTLRAASQKNAHLVENLANLDTLKV
LAAEGEQQGKWEQSTLFLAQVGTRLKLLASSTVNFSGLIQQTTSIAMLVLGVYLIMNGLV
SQGGVIAAVMLCGRAMVPLGQVVGLLTQYHNARTSLGALDSFMKLPVEREKDVSFFHRTH
FKGEIEFRDVSFNYPASPLPSLDNVSFRIRAGERVAIIGRVGSGKSTLQKLILGLFRPTG
GSIRVDGIDTNQIDPAELRRNIGYVPQDVVLFYGSLRDNIAMGSPHVHDASVAAAADQAG
LTGFVNSHPQGFDMIIGERGDTLSGGQRKAVAIARALLNSPPILLLDEPTSNMDHSTERQ
IYQTLESVLPGRTLVLVTHHNALLSLVDRLIVIDQGRIVADGPKAQVMQALQGGQVTGVA
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacagttcgaccgctccggatcccggcgcccagttttcccgtcagtcgacccatgtt
gacccgctgctggactgcctgttttccctggcacgcgcctatggcattgccaccacgcga
gaggcactggtagccggcattccgttggtggagcaccggctgacaccgtcgatgtttgcc
cggtcggcccgccggatcggcctggtttcgcgggtggtccgccagccactgacctcgctg
cgggcagacctgctgcctgcggtcctgctgctgaaggacaacgaagcctgcatcctgcgc
gggatcgagggggacatggcgcagatcagctatccggaactgccggattccacggtcgac
atgccgctcgacaccctgatggccaaccatctggggttgtcgattttcgtgaaaccccgc
ttcagtttcgagcgccgggcaccggagctggcagaaatccggtcacggcactggttctgg
ggaacggtgtattccagctggccgctgtaccgtgatgccctggtggccgcactgctcatc
aacctgtttgcactggtgacgccgattgtcaccatgaacgtgtatgaccgggtcgtgccc
aacatggcgaccgataccctgtgggtgctgacgtcaggcgcagccctggtcctgctgttt
gatttcatgctcaaggtgacgcgcggttatctggttgatcttgccagcaagcgcattgat
gtcaccctgtctgccctgatcatggagcgggtgctgggggtgcgcatggaggcccggcca
gcctcggtgggggcttttgccgccaacctgcgggcatttgaaaccgtgcgggatttcatc
gcttcggcctcgatcaccggcctgatcgacctgccgtttgccctgatcttcattctggcc
attggctgggtgtctccgtggatgatgttgccggtcgtggccggtggcgtcctgatgctg
ggatttgcctggctggtgcaggaaaaaatgcaggagctgacggaaaccaccttgcgtgcg
gcgtcacagaagaatgcccatctggtggaaaacctggccaacctcgacacgctcaaggta
ctggcggccgagggagagcagcagggcaagtgggaacagtccacgctgtttctggcccag
gtcggtacccggctcaagctgctggcctccagtacggtcaatttttccggcctgatccag
cagaccacctcgattgccatgctggtactgggtgtgtacctgatcatgaatggcctggtc
tcccagggcggggtgattgccgcagtcatgctgtgtggtcgggccatggtaccgctcgga
caggtggtgggcctgctgacgcaataccacaatgccaggacgtcgctgggtgcgctggat
tccttcatgaagctgccggtcgagcgtgaaaaggatgtttcgttctttcaccgtacccat
ttcaagggcgaaatagagttccgggatgtttcgttcaattacccggcttctccgttaccg
tcgctggacaacgtgtcgttcaggatccgggccggcgagcgggttgccatcatcggtcgg
gtcgggtcgggcaagtccaccctgcaaaagctgattctcgggctgttccggccaaccggg
ggcagcatccgtgtggacggcatcgacaccaaccagatcgatccggccgaactgcggcgc
aacatcggatatgtgccgcaggatgtcgtgctgttctatggcagcctgcgcgacaacatc
gccatgggttctccccatgtccacgatgccagtgtcgcggcggcggcggaccaggccggc
ctgaccgggttcgtaaacagtcatccgcaaggctttgacatgatcattggcgagcggggc
gacacactgtccggcggacagcgcaaggccgtggccattgcccgggccctgctgaattcg
ccgcccatcctgttgctggacgagcccaccagcaacatggaccacagcacggaacgacag
atctaccagacgctggagtcggtgctgccgggacggacgctggtgctggtgacgcaccac
aatgcccttttgtcactggtggatcgcttgatcgtgattgaccagggacggattgtcgct
gatggtccgaaagcacaggtcatgcaggctctccagggtgggcaggtcacgggggtggca
gcatga
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