Laribacter hongkongensis: LHK_02983
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Entry
LHK_02983 CDS
T00884
Symbol
polA
Name
(GenBank) PolA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk03030
DNA replication
lhk03410
Base excision repair
lhk03420
Nucleotide excision repair
lhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHK_02983 (polA)
03410 Base excision repair
LHK_02983 (polA)
03420 Nucleotide excision repair
LHK_02983 (polA)
03440 Homologous recombination
LHK_02983 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhk03032
]
LHK_02983 (polA)
03400 DNA repair and recombination proteins [BR:
lhk03400
]
LHK_02983 (polA)
Enzymes [BR:
lhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHK_02983 (polA)
DNA replication proteins [BR:
lhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LHK_02983 (polA)
DNA repair and recombination proteins [BR:
lhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LHK_02983 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LHK_02983 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HTH_Tnp_Mu_2
Motif
Other DBs
NCBI-ProteinID:
ACO75961
UniProt:
C1D5E4
LinkDB
All DBs
Position
complement(2892997..2895795)
Genome browser
AA seq
932 aa
AA seq
DB search
MKTLLLIDGSSYLYRAFHAMPDLRSPDGAPTGAVYGMINMLRRLEREVAADYSACIFDAK
GKTFRDDLYPAYKAHRPPMPDDLRQQIAPVHAAVRALGWPLLMVDGVEADDVIGTLAKNA
AAAGFQVVISTGDKDMAQLVTPQVKLVNTMTEEWLDEAGVAGKFGVPPARIIDYLTLTGD
KVDNVPGVDKCGPKTAVKWLENYGDLDTLMAQANEVGGKVGENLRTALAWLPLSRRLVTI
KTDVDLATELPQGFDNLLRPAVDRPAMSALCRELGFRTWLKEYGDGTALTEPVAPARPEA
VADDLFAAAPVAADMPSAPAAASPALVTPTAEARYQTVLTEAALADWLARLAAAPRAAFD
TETDSLDPMQARIVGVSFAVTPGEAAYVPLAHVAPGVEPQLDRDRVLAQLKPWLENPAAA
KVLQNANYDRHVLANHGIRLAGVADDTMLMDYVLASHERHNMDAMAERELGLATIKYEDI
CGKGARQIGFAEVDLDTATRYAAEDADVTLRLRDVLAGKLDGARDTLYSSIELPTAAVLF
AMERTGVLIDRAELARQSQVLGEEMLAIETEVYELAGQPFNLNSPKQLSDILFNKLAIDT
KGVKKTASGGYSTDESVLEKLAEDYPLPKALLRYRGLAKLKSTYTDKLPAMINPDTGRVH
THYSQASVVTGRLASSDPNLQNIPIRTDEGRRVREAFVAPAGSCIVSADYSQIELRIMAH
LSGDAGLIAAFREGRDIHRATASEVFGVPLEAVSAEQRRYAKTINFGLIYGMSAFGLAKS
LEIDNKAAQTFIERYFARYPGVQDYMQRTREAAREQGWVETVFGRRLYLPEIRSSNAARR
AGAERAAINAPMQGTAADLIKLAMIRVADWLQREQLASRLIMQVHDELVLEVPEAERERV
CAALPQEMAAVAGLAVPLVAEVGSGANWGAAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctgttgctgatcgacggctcttcctatctgtatcgcgcattccacgcgatg
cctgatctgcgttcgcctgacggtgcgccgacaggcgccgtctacggcatgatcaacatg
ttgcggcgtctggagcgggaagtggcagccgattatagcgcgtgcatattcgacgccaaa
ggcaagaccttccgcgacgacctctacccggcctacaaggcccaccggccgcccatgccc
gacgacctgcgccagcagatcgcgccggtgcatgccgccgtgcgcgcactgggttggccg
ctcctgatggtcgacggcgtcgaggccgacgacgtgatcggcacgctggcgaaaaatgcc
gctgcggccggctttcaggtggtgatctccaccggcgacaaggacatggcgcagctcgtc
accccgcaggtgaagctcgtcaacaccatgaccgaagaatggctcgacgaagccggtgtg
gccggcaagttcggcgtgccgccggcgcgcatcatcgattacctgaccctcaccggcgac
aaggtcgacaacgtgcccggtgtcgacaagtgcggccccaagactgccgtgaagtggctg
gaaaattacggcgatctcgacaccctgatggcgcaggccaatgaagtcggcggcaaggtg
ggcgaaaacctgcgcaccgcgctggcgtggctgccgctgtcgcgccggctcgtcaccatc
aagactgacgtggatctcgccactgaactgccgcagggctttgacaacctgctgcgcccg
gcggtggaccgcccggccatgagtgcgctgtgccgcgaactggggttccgcacctggctg
aaggaatatggtgacggcaccgccctgacggagccggtcgcgcccgcccgcccggaagcc
gtcgcagacgacctgttcgctgccgccccggtcgcagctgacatgccttccgctcccgca
gcggcttcgcctgcgctggtcactcccaccgccgaagcccgctaccagaccgtgctgacc
gaggctgcgctggccgactggctggcgcggctggccgcggcgccgcgcgccgccttcgat
accgaaaccgacagcctcgacccgatgcaggcgcgcattgtcggggtcagctttgccgtc
acgccgggcgaggccgcctacgtgccgctggcgcatgtcgcccccggtgtcgagccccag
ctcgaccgggaccgcgtgctggcgcaactcaagccgtggctggaaaacccggcggcggcc
aaagtgctgcaaaacgccaattacgaccgccacgtgctggccaaccacggcatccggctg
gcgggggtggccgacgacaccatgctgatggattacgtgctggccagccacgagcgccac
aacatggacgccatggccgagcgcgagctggggctggccaccatcaagtacgaagacatc
tgcggcaagggcgcgcgccagatcggctttgccgaagtcgatctcgataccgccacccgc
tacgccgccgaagatgccgacgtgaccctgcgcctgcgtgacgtgctggccggcaagctg
gacggcgcgcgcgacacgctctacagcagcatcgagctgccgacggcggcggtgctgttt
gccatggagcgtaccggcgtgctgatcgaccgcgccgaactggcgcggcagagccaggtg
ctgggcgaggaaatgctggccatcgaaaccgaggtctacgaactggccgggcagcccttc
aacctcaattcgcccaagcagctgtccgacatcctgttcaacaagctggccatcgacacc
aagggcgtgaagaaaaccgccagcggcggctattcgactgacgaatcggtgctggaaaag
ctggccgaggattacccgctgcccaaggcgctgctgcgttaccgcgggctggccaaactc
aagtccacctataccgacaagctgccggcgatgatcaacccggacaccggtcgggtgcac
acgcactattcgcaggcctcagtggtgaccggccggctggcgtccagcgatcccaacctg
cagaacattcccatccgcaccgacgaagggcggcgggtgcgcgaggccttcgtggcgccg
gcgggcagctgcatcgtgtcggccgactattcgcagatcgagctgcgcatcatggcgcat
ctgtccggtgatgccgggctgatcgccgccttccgcgagggacgcgacatccaccgcgcc
accgccagcgaggtgttcggcgtgccgctggaggccgtcagcgccgaacagcgccgttac
gccaagaccatcaacttcggcctgatctacggcatgagcgcctttggtctggccaagagc
ctggaaatcgacaacaaggcagcgcagacctttatcgaacgctactttgcccgctacccc
ggcgtgcaggactacatgcagcgcacccgcgaggcggcgcgcgagcaggggtgggtcgaa
accgtgttcggccgccggctctacctgccggaaatccgctccagcaacgccgcccgccgt
gccggcgctgaacgcgcggccatcaatgcgccgatgcagggtacggcggctgatctcatc
aagctcgccatgatccgcgtggccgactggctgcaacgcgagcagctggccagccggctg
atcatgcaggtacacgatgaactggtgctggaggtgccggaggccgagcgcgagcgggtg
tgcgcggcgctgccgcaggaaatggccgccgtggccggactggcggtgccgctggtggcc
gaggtcggcagcggagccaactggggcgccgcgcactga
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