Lactobacillus helveticus H10: LBHH_0005
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Entry
LBHH_0005 CDS
T01959
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lhl
Lactobacillus helveticus H10
Brite
KEGG Orthology (KO) [BR:
lhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhl03032
]
LBHH_0005
03400 DNA repair and recombination proteins [BR:
lhl03400
]
LBHH_0005
Enzymes [BR:
lhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LBHH_0005
DNA replication proteins [BR:
lhl03032
]
Prokaryotic type
DNA Topoisomerases
LBHH_0005
DNA repair and recombination proteins [BR:
lhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBHH_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADX69249
LinkDB
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Position
4549..6390
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AA seq
613 aa
AA seq
DB search
MYIGSTSSQGLHHLVWEIIDNSIDERLAGFATKIEITVNEDGSVTVQDDGRGIPVDIQKK
TGRPALETVFTVLHAGGKFGGGGYKVSGGLHGVGASVVNALSTKLDVTVMRDGKKYFIDF
DHGRVKDEMKQIGTVPLDQHGTIVHFYPDPDIFTETTTFDDKILKNRIRELAFLNKGLKL
TFTDKRKDSAETDVYKYEGGIKEYVAFLNKGQEVLFDEPIYVESTYNGIDVEVALQYTNG
YKTTLMTFANNIHTYEGGMHEAGFKTALTRVVNDYAHKAKILKDKDDNLSGEDIREGMTA
VVSVKHPSPQFEGQTKTKLGNSDARTAVDKSFSETFSRFLMENPSVGRKIVEKGQLAERA
RTAAKRAREVTRKKSGLEIANLPGKLADNTSNDPSISELFIVEGNSAGGSAKQGRSRLTQ
AILPIRGKILNVEKASMDRILANQEIRSLFTALGTGFGADFDVSKARYHKLIIMTDADVD
GAHIRTLLLTLFYNYMRPMIEKGYVYIARPPLYQVRQGKVIKYLDTDEELHDYLGSLQPS
PKPVVQRYKGLGEMDPEQLWETTMNPENRRLDRVSPEYAKDADAVFELLMGNEVAPRRDF
IQKNAKYVENLDA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcggttcgactagttctcagggattgcaccacttagtgtgggaaattattgat
aacagtattgatgaacgacttgctggttttgctaccaagattgaaattactgttaatgag
gatggtagtgttactgttcaagatgatggtcgtggtatcccagtagatattcaaaaaaag
acaggtcgtccagctttagagactgtatttactgtacttcacgccggtggtaaattcggc
ggtggcggatataaggtatcaggtggtcttcacggtgttggtgcatctgttgtaaatgct
ttgtccaccaagcttgatgtaactgtcatgcgtgacggtaaaaagtatttcatcgatttt
gatcacggccgcgttaaggatgaaatgaagcagattggtactgtgccacttgatcaacat
gggactattgttcatttctatccagatcctgacatttttactgaaactactactttcgat
gacaagatcttaaagaatagaattcgtgaacttgcatttttaaacaagggattgaaactt
acttttacagataagcgtaaagatagtgccgaaaccgatgtatacaagtacgaaggtggt
attaaagaatacgttgcctttttgaacaaggggcaggaagtattatttgatgaacctatc
tatgtcgaaagcacatataacggcattgacgtggaagttgctttgcaatatacaaatggc
tacaaaactactttaatgacctttgccaacaatatccatacctatgaaggcgggatgcac
gaagccggcttcaagactgctttgactcgtgttgtaaatgattatgctcataaggcaaaa
atcttaaaagacaaggatgataacctttctggtgaagacatccgtgaagggatgacggct
gttgtttcagttaagcaccccagccctcaatttgaagggcagactaagacaaaattgggt
aactcagatgctagaacagcagtagataagtcattctctgaaacctttagtcgcttcttg
atggaaaacccatcagttggacgcaaaattgtggaaaagggtcaacttgccgaacgtgct
agaaccgctgctaagcgtgcacgtgaagttactcgtaaaaagtctggtttggaaattgca
aacttgccaggtaaattagccgataatacaagcaatgatccaagtatttctgaattattc
atcgttgagggtaactcagccggtggttcagctaagcaaggtagatctcgtttaacccaa
gccattttaccaatcagaggtaagattttaaacgttgaaaaagcttcaatggatcgaatt
ttggccaaccaagaaatcagatctttgtttacagctttaggtacaggatttggtgcggac
tttgatgtgtctaaagcacgttatcataagttgattattatgactgatgccgatgtcgat
ggtgctcacattagaactttgcttttgacgctgttttacaattacatgcgtccaatgatt
gaaaaaggatatgtatacatcgctcgtccacctctgtaccaagtccgtcagggcaaggta
attaagtatcttgatactgatgaggaattgcatgattacttaggtagtttgcagccaagt
cctaagcctgttgtacagcgttacaaggggttaggtgaaatggacccagagcagttatgg
gaaactactatgaatccagaaaatagacgtttggatcgagtaagtcctgaatatgccaag
gatgcagatgcagtctttgaactcttaatgggtaatgaagttgctccaagacgtgacttt
attcaaaagaatgctaaatatgttgaaaatttggatgcatag
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