Lactobacillus helveticus H10: LBHH_0078
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Entry
LBHH_0078 CDS
T01959
Name
(GenBank) Exodeoxyribonuclease A
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lhl
Lactobacillus helveticus H10
Pathway
lhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBHH_0078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhl03400
]
LBHH_0078
Enzymes [BR:
lhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LBHH_0078
DNA repair and recombination proteins [BR:
lhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LBHH_0078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADX69318
LinkDB
All DBs
Position
77710..78564
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AA seq
284 aa
AA seq
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MKYFKRGKIMILISWNIDSLNAALTGTSARAEETRGVLDKIHALNPDIIAIQETKLRATG
PTKKHQTILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEE
GRIITLEFDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNEKKPVLASGDYNCA
HTEIDLKHPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSWWAQRVRTAK
ANNSGWRIDYWLVSNRIADKVVRSEMIDTGKRADHCPILLEINL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatattttaaaaggggaaaaataatgattttaatttcatggaatatcgattcattg
aatgcggcattaactggaacttcagctagagcagaagaaacgcgtggagttttagataaa
attcatgctctaaatccagacattattgcgattcaagagactaagttgcgtgcaactgga
ccaactaaaaagcatcaaaccatattagctgaaaagtttcctgaatacgactatgtgtgg
cgttcatctgaagaacctgctagaaagggttatgcaggcacaatgtacttgtataagaag
gaattaacgccagcagtttctaaaccagcaattggtgcgcctgaaccaatggatgaagag
ggacggattatcactttagaatttgataaatattttgtcactcaagtttatacgccaaat
tcaggcaacggtttgaaacgtttagctgatcgtcaagtttgggatcaaaaatatattgaa
tatttgaaaaagttaaatgaaaaaaagccagttttagcaagtggggactataactgtgct
catactgaaatcgacttaaagcatcccgaaaataatcatcattctgccggctttactgat
gaagaaagagcagattttactaatttacttgatgctggctttactgacacctttagaaaa
gtcaatggcaacgttgaaggcgtttattcttggtgggctcaaagagttagaaccgctaaa
gccaacaactcaggctggagaattgattattggttagtaagcaaccgaattgccgataaa
gtagttcgctcagaaatgatcgatactggcaaacgtgcagatcattgcccaattttacta
gaaataaatctttaa
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