Lactobacillus helveticus H10: LBHH_0329
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Entry
LBHH_0329 CDS
T01959
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
lhl
Lactobacillus helveticus H10
Brite
KEGG Orthology (KO) [BR:
lhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhl03400
]
LBHH_0329
DNA repair and recombination proteins [BR:
lhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBHH_0329
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
nSTAND3
Lon_C
AAA
RecA_N
SLFN-g3_helicase
AAA_14
AAA_16
GvpD_P-loop
AAA_24
AAA_22
NACHT
DUF7129
nSTAND_NTPase5
ABC_tran
NTPase_1
RUBY_RBDX
CbiA
RNA_helicase
NPHP3_N
ATPase_2
AAA_5
AAA_19
DUF2642
divDNAB
NB-ARC
HypA
Motif
Other DBs
NCBI-ProteinID:
ADX69560
LinkDB
All DBs
Position
342626..344002
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AA seq
458 aa
AA seq
DB search
MARVKTQYKCRSCGYISASYLGRCPNCGAWNQFEKETEEVQKRSTKATASRLIQKTGLNE
PVHLDKIKAEKEERIPTKSEELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLHIMSDLAEK
YKVLYVSGEESANQIKLRADRLGVGQSNMLLYPETDMHDIREQINDVKPDFVVIDSIQTM
NEPSLDSMTGSASQVREVTSELMKIAKMDAITVFVIGHVTKEGAIAGPKILEHMVDTVLY
FEGDEHHTYRILHSVKNRFGAANEIGMFEMENEGLREVTNPSSIFLDQRLPNSTGSAVVV
SLEGTRPLLAEIQALVTPTAFGYAKRTTSGISFNKASLLLAVLEKRGNLMLQNQDVYLTA
TGGIKLNEPAIDLAIAMSAASSYTDKEISPTDCFVGEVGLTGEVRRVDKIEARVKEAAKV
GFKRIFIPKHNMYQSLTENGIEVIPVASIPQALKLVFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctagagtaaaaacgcaatataaatgtcgttcctgtggttatatttcagctagttac
ttgggtcgttgtcctaactgcggtgcatggaatcaatttgaaaaagaaactgaagaagta
cagaaaagatctactaaagcaacggcaagccgtttaattcaaaaaacaggtcttaatgaa
cctgttcatttggataaaatcaaggctgaaaaagaagaacgaattcctactaagtccgaa
gaattaaatcgtgtattaggtggcgggatcgttcctggatccctcgtcttaattggtggg
gaccctggtattggtaagtcaactttaatgttgcatattatgagtgatctggcagaaaaa
tataaagtgctttatgtttcaggagaagagtcagctaatcaaatcaagctgagggcagat
cggcttggagttggtcaaagcaacatgcttttatatccagaaacagatatgcatgatatt
cgtgagcagatcaatgatgttaagcctgattttgtcgttattgattctattcaaacgatg
aatgaacctagtcttgattcaatgactggttctgcttcacaagtacgtgaggtaacaagt
gaattgatgaagattgctaagatggatgcaattactgtttttgttattggacacgtgact
aaagaaggtgcgattgctggccccaaaattttggaacacatggtggatactgtcctttat
tttgagggggatgaacaccacacataccggattttgcattccgtaaaaaatcgttttggt
gctgctaacgaaatcggcatgtttgaaatggaaaatgaaggcttacgtgaagtaaccaat
ccatcttcgatttttcttgatcaaagattacctaattcaactgggtcagccgtagtagtt
tcacttgaaggaacgcggccacttttggcagaaattcaagcattagtaacgccaactgca
tttggctatgccaaacgaactacttcaggaattagttttaataaagcttcactattatta
gcggttcttgaaaaacgcggcaatttaatgcttcaaaatcaggatgtttatttaacggct
actggcggtattaaattaaatgaacctgcaatcgatctagctattgctatgtcagcagca
tcaagctacaccgataaagaaatctcaccgactgattgttttgtaggggaagtgggatta
accggtgaagttcgccgcgttgataaaatcgaagctagagtaaaggaagctgccaaggta
ggttttaaacgtatttttattcctaagcacaatatgtatcaaagtctaacggaaaatggc
attgaagtaattccagttgccagcattccacaggcattaaaattagtttttggctag
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