Lactobacillus helveticus H10: LBHH_0402
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Entry
LBHH_0402 CDS
T01959
Name
(GenBank) MutS2 protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
lhl
Lactobacillus helveticus H10
Pathway
lhl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LBHH_0402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhl03400
]
LBHH_0402
DNA repair and recombination proteins [BR:
lhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LBHH_0402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DUF6468
AAA_21
AAA_24
Rad33
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADX69631
LinkDB
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Position
411799..414156
Genome browser
AA seq
785 aa
AA seq
DB search
MNDKILKILEFGEITKRLSKLAITAPAKEAALKLRPSSNFDQVQNELKQTLALADLLRVK
GRLPLTDFQDVHPSTKRLGVKANLNAQELGNLLLVLSLANEINEFLEDVDDEKLNLSAID
SVLDQLDVPDLLFRELKKSVDYDGEVLDTASNALARLRHDMRSNEEDIKNRMDAYTKGNS
SKYLSEQIVTIRDDRYVIPVKQEYRGKFGGVVHDQSASGQTLFIEPEAVLNLNNRQQNLI
AQEKQEIRNILKHLSSLAREEINSINNIANSLTRLDFLQAKAKLAKEMKASKPKLTQDHS
LELRNARHPLIDPEKVVPNDIRLGGDSDTMLITGPNTGGKTITLKTAGLLQLMAQSGLFI
PAEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDIIAIMKNVDKETLVLIDEIGAGT
DPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYNRPRTINASMEFDLKTLSPTYHL
QIGIPGHSNAFAIARRLGMREDVVKNAQNLMSDEDSDINKMIAKLNAQTKAATTARNRLE
TSLDRSQKLEQKLQQALDWYNQRVQKQLDFAQERANEVVAKRRKKADKIIAELEKQKNVG
VKENKIIEAKGELNSLERQAHNLAHNKVLQREKRRHHVSVGDQVKVLSYGQTGTITKKLS
EHEYEVQMGIIKVKVSDRDIERIAKNNAQPKKKLVRATSAIRRSNAHSELDLRGQRYDEA
MTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLRSSNHVKGFNYAPANEGGNGAT
IVKLK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataaaattttaaaaatcttagagtttggcgaaattactaaaagattaagcaaa
ttagcaattaccgctccagctaaagaggcagcactaaaattgcgaccaagcagtaatttt
gaccaagtacaaaatgaattaaagcaaacgttggcattggctgacttattgcgagttaaa
ggacggcttccgttaactgactttcaagatgttcatcctagtactaaaagattgggcgtt
aaggcaaatttaaatgcacaagagctagggaatttgcttcttgttttaagtttagctaat
gaaatcaacgaatttctggaagatgttgatgatgaaaagcttaacttatcagctattgat
tcagttttggatcagctagatgttccagatcttttatttagagaattaaaaaagtcagtt
gactatgatggtgaagtacttgatactgcttcaaatgcattagcgcgtttgcgtcatgat
atgcgcagcaatgaagaagatattaagaatcggatggatgcttatactaaaggaaatagc
agtaagtacttatctgaacaaatcgttactattcgtgatgatcgctatgttattccggtt
aagcaagaatatcgtggcaagtttggcggtgtggttcatgatcaaagtgccagtggtcag
actttattcattgaacctgaagcagtattgaatttaaacaaccgccaacagaatttaatt
gctcaagaaaaacaagaaattcgcaatattttaaagcatttgtctagcttagctagagaa
gagatcaacagcatcaataatattgccaattcattgactcgcttagactttttacaggca
aaagccaagttagctaaagaaatgaaggccagcaaacctaagttgactcaggatcattcg
ttagaattacggaatgcacgccatccgttgattgatccagaaaaagttgttcctaacgat
attcgcttaggtggcgattctgacacaatgctgattactgggccaaacactggtggtaag
actattactcttaaaaccgcggggttgttgcaattaatggctcagtctggtctatttatt
ccagctgaagaaggcagcaaagttggcgtattcaaagaagtttacgctgatattggtgat
gaacaatcaattgaacaatcattaagtactttttcatcacatattaatgacatcattgcc
attatgaaaaacgtagataaagaaactttggttttaattgatgaaattggtgcaggaacg
gatccagaagaaggggctagcttggctattagtattttggactttttgcgcaaaaaagat
gctaagatcatggttactacgcactatccagaattgaaactttatggatacaatagaccg
cgcactatcaatgcatcaatggaatttgacttgaagactttgtcaccaacataccatttg
caaattggaattccaggtcatagtaatgcttttgcgattgcccgcagactggggatgcgt
gaagatgtagttaaaaatgcgcagaatttaatgtcagacgaagattctgatattaataag
atgattgccaaattaaatgcgcaaactaaagcagctactactgcacgcaaccgattagaa
acaagtttggatcgcagtcaaaagcttgagcagaaattgcagcaagcacttgattggtac
aatcaacgcgttcaaaagcaacttgattttgcccaagaaagagctaatgaagttgtggct
aaaagacgtaaaaaagctgataagattattgcggaattggaaaagcaaaaaaatgttggc
gttaaagaaaataagattattgaagccaagggtgaacttaacagcctagaacgtcaggct
cacaatttagcccataataaggtcttacagcgtgaaaaacgtcgacatcatgtaagtgta
ggggatcaagtaaaggtcctttcatatggacaaacaggcactattactaagaaattgtct
gagcatgaatatgaagtgcaaatggggatcattaaagtcaaagttagtgatcgtgatatt
gagagaattgctaagaataatgcccagcctaagaaaaaactggttagagcaacgagtgcg
attagacgtagcaatgcacatagtgagctcgacttgcgtggtcaacgctacgatgaagcc
atgactaatttagatcgttatattgattctgctttgcttgctgggttagatattgtaacg
attattcatggaattggtactggcgcaatccgtaagggtgtttggcaatatttacgcagc
agcaatcatgttaaaggctttaattacgcgcctgctaacgaaggtggtaacggtgccaca
attgttaaattaaagtag
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