Lactobacillus helveticus H10: LBHH_0818
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Entry
LBHH_0818 CDS
T01959
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhl
Lactobacillus helveticus H10
Brite
KEGG Orthology (KO) [BR:
lhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhl03016
]
LBHH_0818 (truB)
Enzymes [BR:
lhl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LBHH_0818 (truB)
Transfer RNA biogenesis [BR:
lhl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LBHH_0818 (truB)
Prokaryotic type
LBHH_0818 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADX70029
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All DBs
Position
854021..854914
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AA seq
297 aa
AA seq
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MLNGILVIDKDKGMTSADVVYHLRKALYIRKIGHAGTLDPEVTGVLPIAIGQATKLIELM
HTRPKEYIGSGLFGYATDSYDSTGTVLKKTKLTQAFTSDDIQSHMNEFLGEIEQVPPIYS
AVKVNGKHLYEYAREGIAVERPKRKVDILQYDLTDKPVFNETEGQEKFDFRIKCSKGTYV
RSLVNDLGEKMNCPAVMTYLRRVVSSGFDISQAVKLSEIEANPEKAVELIQPIDAFFKDY
PQIDLSEGKWLKVKNGAGISLEIDAKKVALRYNKKVKAIYEKKGKLYRPSLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggaattttagttattgataaagacaaagggatgactagtgctgatgtagta
tatcatttgcgaaaagctttgtatattcgaaaaattggacacgctggtacacttgatccc
gaagtaaccggagtattgcctatcgcaatcggacaagcaactaagttaattgaacttatg
catactagacctaaagaatatattggtagtggtttatttgggtatgctacagatagttat
gattcaacaggtacagttttaaaaaagactaagctaactcaagcttttacttccgatgat
attcaaagtcatatgaatgaatttttaggtgaaatcgaacaagtaccgccaatttattca
gcagtaaaagtaaacggcaagcatttatatgaatatgctcgagaaggaattgcagtagaa
cgacctaaacgcaaagttgatattttgcaatatgatttgacagataaacccgtatttaat
gaaacagaaggacaagagaaatttgattttcgaattaagtgtagcaaaggtacttatgtc
agatcattagtaaatgatttaggcgaaaaaatgaactgtcccgcagtgatgacttattta
agaagagtagttagttcaggttttgatatttctcaagcagttaaattaagtgaaattgag
gccaatcccgaaaaagcggtagaattgattcagccaattgatgctttctttaaagactat
cctcaaattgacttaagtgagggaaaatggcttaaagtaaaaaatggtgcaggtatttcg
ttagaaatagatgctaaaaaggttgcattaaggtacaataaaaaagtcaaggcgatttat
gaaaagaaaggtaaattatatcgcccaagtttaatgttgcttcaaaatgagtaa
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