Lacticaseibacillus huelsenbergensis: LHUE1_000360
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Entry
LHUE1_000360 CDS
T09416
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03030
DNA replication
lhn03430
Mismatch repair
lhn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHUE1_000360 (holB)
03430 Mismatch repair
LHUE1_000360 (holB)
03440 Homologous recombination
LHUE1_000360 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhn03032
]
LHUE1_000360 (holB)
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_000360 (holB)
Enzymes [BR:
lhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHUE1_000360 (holB)
DNA replication proteins [BR:
lhn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHUE1_000360 (holB)
DNA repair and recombination proteins [BR:
lhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHUE1_000360 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
LON_substr_bdg
CLIC-like_N
Motif
Other DBs
NCBI-ProteinID:
WFB39628
UniProt:
A0ABY8DRM0
LinkDB
All DBs
Position
complement(401830..402807)
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AA seq
325 aa
AA seq
DB search
MAKFLIDSLQPKLVAQFARIIDRKQLAQSYLFVGPKGAGKLELAEWIALRLFCQNVQDGA
PCGECPECERILNHNHPDVMVLKTSTQSIKVDDIRNLKQEMSKTGVEGNRRVFIVEDADK
MTAGAANSLLKFFEEPVPGMTVILTASSKNQLLPTILSRAQVITFQSPDRQALIAKLEED
GANPQLARVAGRLTGNVSEAQELLTAEDFQDRVNRVFQLLDRLADHDPESFVRVQTQLLP
VAKDAAAQRQVLALIGLAYADALNRHFEIAATQQLDIPAVAALAKLSSRQLTDDLQAILT
AQVRLSQNVTFQSATEQLMLKLLEG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtttttgattgattcgttgcagcctaagttagtcgcccaatttgcccgaatc
attgaccgcaagcaactggcccaatcctatttgtttgtggggccaaaaggtgccggtaag
ttggaactggctgaatggattgccttgcgcctattttgccaaaatgtccaagacggtgct
ccttgtggcgaatgtcctgagtgtgaacgtattttgaatcacaatcatccggatgtgatg
gtgctcaaaaccagtacccaaagcattaaggttgatgatattcgcaacttgaaacaggaa
atgagcaaaaccggtgtggaaggcaaccgccgcgtgtttatcgttgaagatgctgataaa
atgactgcaggagcggctaattcactactgaagttttttgaagaaccggttccgggcatg
acggtgattctcactgcttcatcgaaaaatcaacttttgccaacgattttatcgcgggcg
caggtgattacgttccaaagccctgatcggcaagcgctgattgccaaattagaagaagac
ggtgccaatccgcaattggcgcgggtggctggccggttaaccggtaatgtcagcgaagct
caggaattattgactgccgaggactttcaggatcgggttaatcgcgtgtttcaattgctg
gatcgcctagctgaccatgatcctgaaagctttgtgcgggtgcagacccaattgttgccg
gttgcaaaagatgctgcggcacaacgtcaggttttagcgctgatcggtttggcgtatgcc
gatgccttgaatcgccattttgaaattgcggcgacgcaacagctggatattccggcggtt
gctgcgttggcgaagttatcgagtcggcaactgaccgatgatttgcaggccattttaacg
gcgcaggttcgcttgagccagaatgtgacgtttcagtcggcaacagaacagttaatgctt
aaactcttagaagggtga
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