Lacticaseibacillus huelsenbergensis: LHUE1_000668
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Entry
LHUE1_000668 CDS
T09416
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LHUE1_000668 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhn03021
]
LHUE1_000668 (rpoE)
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_000668 (rpoE)
Transcription machinery [BR:
lhn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LHUE1_000668 (rpoE)
DNA repair and recombination proteins [BR:
lhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LHUE1_000668 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Patatin
Motif
Other DBs
NCBI-ProteinID:
WFB39902
LinkDB
All DBs
Position
complement(746217..746900)
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AA seq
227 aa
AA seq
DB search
MYRLKLKAFANADKSELSMIEVAHEILEEKGDTMAFVDLANEIQTYLGKSDEEIRERLPQ
FYTDLNVDGSFISLGDNVWGLRAWYPYDSVDEEVNHPEDEEEVPRRKKRKKVNAFLADVA
DDDDVIDYNDDDPEDEDLDADNDDDDFDDDDHTGFHDKIGKAAATDDDSDDDPDDGLPDG
IEGQLAEFGDNDSDDDDDNDDITADFSGDDDSDDDDSDDDDSDSDKH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcggttgaaactcaaagcatttgccaatgccgataaatcagaattatcaatgatc
gaagtagcccatgagatcctcgaagaaaaaggggataccatggcgttcgttgatctggcc
aacgagatccagacttatctcggtaagagtgacgaagaaattcgtgaacgtttgccgcaa
ttttacacggatctgaacgtggatggcagtttcatttctttaggcgataacgtttggggc
ctgcgcgcttggtatccatacgattccgtcgatgaagaagttaaccatccggaagatgaa
gaagaagtaccacgtcgcaagaagcgcaagaaggttaatgccttcttggctgacgtagcc
gatgacgatgatgtcattgattacaacgacgatgatcccgaagatgaagatctcgacgcc
gacaacgatgacgatgattttgacgacgatgatcataccggctttcatgataagatcggc
aaagctgctgcaactgacgatgacagcgacgacgaccctgacgatgggttgccagatggc
attgaaggccagctagccgagttcggagacaatgacagcgacgatgatgacgataacgac
gacatcacggctgacttctccggtgatgatgacagcgatgacgatgatagtgatgatgac
gatagtgacagcgacaagcactag
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