Lacticaseibacillus huelsenbergensis: LHUE1_002037
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Entry
LHUE1_002037 CDS
T09416
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHUE1_002037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhn03019
]
LHUE1_002037
Messenger RNA biogenesis [BR:
lhn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LHUE1_002037
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Ish1
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WFB38506
UniProt:
A0ABY8DNE9
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Position
complement(2207668..2208909)
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AA seq
413 aa
AA seq
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MTTIRFLNGLNTIGGNIVEFATKTSRVIMDFGVAADLSQETVASALEQGKLPHVPELFFN
QPDHFSDEAIFISHLHIDHMGALQYLQKDIPIYLSEPSYRLYRLLIQLGIEKPVANLHPL
AFETPLAVGDLTVTGFHSDHDEPGVMALLVDDGSRRFAHSGDVRLNGPHADRVHAWAKRF
KEEKVSLLMLEGTSFSFDTPIPVEDQDHPSVPLTEMSLQTKFQQLLADSSQLVVINPYNR
NYERLEAFQVSAHVNGRQMVWEPNEAAILTSMTGTQPDAILGQTIQLTDIAQQPQRYVLQ
NSFANLASLANLPISAYVHSNGEPLGDYDPRFAQLKDWLADHQIPLVFMNASGHAAREDL
IELVKEVNPRVVVPWHSFHPEREADAIDAQTNADVLLPEKDLYYDFDPLTEEE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgactacaattcgctttttaaatgggttaaataccattggcggaaatattgtcgagttt
gccactaaaaccagccgggtcatcatggactttggggttgcggctgatttaagccaggaa
actgtagcttcggccctcgagcagggaaaactgccgcatgtgccggaactctttttcaat
caacctgatcatttttccgacgaagcaatttttatctcccatctgcatattgaccacatg
ggcgctttgcagtacttgcaaaaggatatcccgatttatctttcggaaccgtcctaccgc
ctctatcgactgctcattcagttgggtatcgaaaaaccggtcgctaacctacatcctctc
gcttttgaaaccccgcttgccgttggcgatctgacggtcactgggtttcacagtgatcac
gacgagccgggtgtcatggcgttgctggtcgatgacggttcgcgccgttttgcgcactca
ggcgatgtccggctcaacggcccgcatgctgatcgggttcacgcatgggccaaacggttt
aaggaagaaaaagtgagtcttttgatgctggaaggcactagtttttcgtttgacaccccg
attcccgttgaagatcaggatcatcccagtgtgccattgacggaaatgagcctgcagacc
aagtttcagcaattattggcggatagctcacagctcgtggtcatcaacccttacaatcgc
aattacgagcgcttagaggcatttcaagtttcggctcatgtcaatggtcggcaaatggtt
tgggagcctaatgaagcggctattttgacatctatgaccggtacgcagcccgatgccatt
ctcggccaaacgatccagctgactgacattgcccagcaaccgcaacgctacgttcttcaa
aacagctttgcaaatctggcctcactagcaaacttaccgatcagcgcgtacgttcacagc
aacggtgaaccgctgggcgactatgatccgcgtttcgctcagttaaaagattggttggct
gatcaccagattccattagtgttcatgaatgcctcaggccacgccgctcgggaagatttg
attgaactagtcaaagaagtcaacccgcgtgtcgtcgtgccgtggcatagcttccatccc
gaacgcgaggctgacgcgattgatgcccagacaaatgccgatgttctattgccagaaaaa
gatttgtattacgatttcgatcctttaactgaagaagaatag
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