Lacticaseibacillus huelsenbergensis: LHUE1_002050
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Entry
LHUE1_002050 CDS
T09416
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03030
DNA replication
lhn03430
Mismatch repair
lhn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHUE1_002050
03430 Mismatch repair
LHUE1_002050
03440 Homologous recombination
LHUE1_002050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhn03032
]
LHUE1_002050
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_002050
Enzymes [BR:
lhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHUE1_002050
DNA replication proteins [BR:
lhn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHUE1_002050
DNA repair and recombination proteins [BR:
lhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHUE1_002050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WFB38518
UniProt:
A0ABY8DNG6
LinkDB
All DBs
Position
complement(2220718..2221260)
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AA seq
180 aa
AA seq
DB search
MDFIAMDFETANRKRASACSLALVVVQQNRVVDSFYTLINPQMRFDPQNIRIHGITPDMV
QNQPTFDQVWPHIQMFYTPGRIVTAHNAPFDVSVLRLTLDRYGIAAPRYQVIDTVRTSRQ
FLPKLPNHRLDTVSAALKIPLEHHHNALADSYACARILIAENEHFGEARTKVMMKLAKAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggactttattgccatggattttgaaaccgccaatcgcaaacgggcctcggcctgttcg
cttgccttagtggtcgtgcagcaaaatcgggttgttgatagtttctacacgctcatcaac
ccgcagatgcgctttgatccgcaaaatattcgcattcacgggatcacaccggatatggtt
cagaaccagccgacgtttgatcaggtttggccacatatccagatgttttatactccgggt
cgcatcgtcacggctcacaatgccccgtttgatgtgtcggtgttgcgcctgacacttgac
cggtatggcatcgctgcgccgcgctatcaggtgatcgacactgttcggacttcacggcaa
tttttaccgaagctgccgaatcatcggttggatacggtcagtgctgcgttaaaaattccg
ctggaacatcaccacaacgcgttggcagatagttatgcctgcgcacgaattctcattgcc
gagaacgaacattttggcgaagcccgaacgaaagttatgatgaaactggctaaggctggt
tga
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