Lacticaseibacillus huelsenbergensis: LHUE1_002099
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Entry
LHUE1_002099 CDS
T09416
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03420
Nucleotide excision repair
lhn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LHUE1_002099 (pcrA)
03430 Mismatch repair
LHUE1_002099 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_002099 (pcrA)
Enzymes [BR:
lhn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHUE1_002099 (pcrA)
DNA repair and recombination proteins [BR:
lhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LHUE1_002099 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LHUE1_002099 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
WFB38565
LinkDB
All DBs
Position
2269429..2271681
Genome browser
AA seq
750 aa
AA seq
DB search
MVMDAALKGMNDKQTEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKNVNPWNILAI
TFTNKAAREMRERVGKLVDPEIARDIWVSTFHALCVRILRRDIDKLGYNRAFTIADPAEQ
LTLVKHILADFNLDPKRYDPKSILGAISNAKNDLIDPQTYADEQANSPFTKIVAEVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDKETLAFYQRKFRYIHVDEYQDTNEAQYRLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKKDFPKARVILLEQNYRSTKTILSAANDVI
KNNLNRQVKTLWTENSKGDKITYYRAQSETDEAIFVIRRIEEEMAEHHRHYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPEDDMSFTRIVNEPKR
GIGNTSVEKLEAFASQHGWSLLEAAGNAELSPISGKARGNLAKFGKMIQELGTRRKDLNV
TDMMQAILDESGYLDALRAAHTLEADTRIENLEELLSVTQGFDERYQPENEDSDIFVDFL
AELALLSDQDEVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRAAMDEGELEEE
RRLAYVGITRAKQKLYLSNAYARMLYGQRQNNPASRFIEEIDPDLLEVVGGNQPKSDIPF
INRTDRAFSSPYSRHAETAATPVTVKPVPTTGAGKTSWEAGDKVTHRKWGTGTVVKVTGT
GDDQELDIAFKAMGIKRLLAAFAPIKKIES
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggatgccgcattaaagggtatgaacgataagcagactgaggcggtactggcc
accgaaggaccggttttaattatggcaggtgccggctccggcaagacccgggtgttaacg
caccggattgcttatttggtagaagaaaaaaacgttaatccatggaacatccttgccatc
accttcacgaataaagcagctcgtgagatgcgtgaacgggtagggaagctcgttgatcct
gaaattgctcgggatatctgggtctcgaccttccatgcactttgcgtccgaattttacgg
cgagatatcgacaaacttggctataatcgcgcctttacaattgccgatccagctgaacag
ctgacgttggttaaacacattctggcggatttcaatttggatcccaaacgctacgacccc
aagtcaatcctgggggccatttcgaatgccaaaaatgatttaatcgatccgcagacttat
gcagatgaacaggctaatagtccctttaccaaaattgtcgcggaagtttatgcggagtat
caaaaacggctccgtagcgatcaggcgttggattttgacgatctgatcatgcaaaccatc
gtgttatttgaaaaggacaaagagacactggcgttttatcaacgtaagttccgttatatt
cacgttgatgagtatcaggacacaaacgaggcccagtatcgcctcgtgcacatgttggcg
gaaggttatcacaatctttgtgtagtcggggatgcggatcagagcatttatggctggcgc
ggtgccaacatgcagaacattctggatttcaaaaaggatttccctaaggctcgcgtgatt
ttgcttgagcagaattatcgctccacgaagaccattttaagtgcggccaatgacgtgatt
aagaacaacctgaatcgtcaggtgaagacgttgtggaccgaaaatagcaaaggtgacaaa
atcacgtattatcgcgcccaaagtgaaactgacgaagcaatttttgtcatccgacgcatc
gaagaagaaatggccgaacatcatcgccactatggtgattttgcgattttgtatcgaacg
aacgcacagtcacgggcgattgaagaggcgttcgtcaagtccaatattccttacaaaatg
gtgggcggtcacaagttctacgatcgtaaggaaattcgggatgcgcttgcgtattttcgt
ttagtcgtcaatcctgaagacgatatgagtttcacacggattgtgaacgaaccaaagcgt
ggcattggtaataccagtgtcgaaaagctggaagcatttgccagccagcatgggtggtcg
ttgttggaagcagcaggcaatgccgaactcagtcccatttctggcaaagcgcgcggtaat
ctggcgaagtttggcaaaatgattcaggaactcggcacccgccgcaaagatttgaatgtt
acggacatgatgcaggctattctggatgaaagtggctatctggatgcgttgcgggcagca
cacacgctggaagccgatactcggattgaaaaccttgaagaactgctatcggtgacgcaa
ggatttgacgaacgctatcagccggaaaatgaggacagcgatattttcgtcgactttctg
gctgagttggcgctgctgtcggatcaggacgaagtagaagaagatgcccaggaagttacc
ttaatgacgttgcatgcggctaaaggactggaatttccggttgtctttttggttggcatg
gaagaaggactcttcccgctgagtcgggcggctatggacgaaggcgagcttgaggaagag
cggcgtctcgcgtacgtcggcatcacgcgcgccaagcaaaagctatatctgtccaatgcc
tatgcccgaatgctatacggccagcgacaaaataatccggctagtcgttttattgaagaa
atcgatccggacttgcttgaagtcgttggtggcaatcagccgaaaagcgatattccgttt
attaaccggaccgatcgggcatttagttcgccgtatagccgccatgccgagaccgccgca
acgccggtgacggttaaaccagtaccgacaaccggcgctggcaagaccagttgggaagct
ggcgacaaggtgacgcatcgtaagtggggaacgggtaccgtcgtcaaggtaaccggaacg
ggtgatgatcaggaattggacattgcctttaaagcgatggggatcaagcggttgctagcc
gcgtttgccccgatcaagaaaattgaatcttga
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