Lacticaseibacillus huelsenbergensis: LHUE1_002367
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Entry
LHUE1_002367 CDS
T09416
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LHUE1_002367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_002367
Enzymes [BR:
lhn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LHUE1_002367
DNA repair and recombination proteins [BR:
lhn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LHUE1_002367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
HHH_5
UvrD_C
UvrD-helicase
IMS_HHH
AAA_16
HHH
H2TH_5
AAA_18
HTH_IclR
AAA_29
RecR_HhH
AAA
AAA_28
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WFB38823
LinkDB
All DBs
Position
2555462..2557930
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AA seq
822 aa
AA seq
DB search
MDRHEDSVTGRVKSIFFQNPTNFFKILLIDITATTITWTEPDIVVTGTFGDIKEDETYTF
TGHVIDHPKYGQQFQADNYHVDQPTNKTGLINYLSSDKFPGIGPKTAEKIIGKLGVDAIN
QILDDPASLEGLGITAAKRKMLVDNLKTNQGMERVIIGLNDYGFTSNMAGRIYQQYQNDA
LEVIKQNPYQLINDIAGIGFTRADQIAAKLNIAPDSQLRLGGAVMDTLQRLTDGEGDTFV
ELRTLVTQTLDLLERARNIAVKPDDVGQAIVTLAKDNELVAEDKRIFPKRLYDSEWQIAR
QLKGLAEAGAKAEEPELPDIEKTLAEVQADTGIAYDDVQKKAIVTALRSPIFLLTGGPGT
GKTTVTDGIVRTYARLHDLSLDANQYNSDDPFPIMLAAPTGRAAKRISETTQLPASTIHR
LLGLGVDTQDFAPNDLPDGLLIIDEMSMVDTYLFRTLLTALHPGMQIVLVGDKDQLPSVG
PGQVFADLLRSGALPQAALTHIHRQDADSSIIPLAHAVNAGKLPDDFTQPQVDRSFLACA
PNQVPEVVGQVVKRAAVKQFSIADIQVLAPMYRGTAGIDRLNPMLQNILNPKRSARTKTV
HFGDTEYRIGDKILQLVNDPNQNVFNGEIGQIVGITLAKEAPSKTDELTIDFDGNEITYK
RSDFSKITLAYATSIHKAQGSEFPMVILPLTLQSRRMLRRNLLYTAITRAKSFLILVGEL
AAFETAVGEVAVNRHTGLVQRLQQVFDIEGSQTAVEEATVPQPALPQEPTQIDTNGSDSD
NEVRPAKTAPHQLTPALAASQKIDPMIGMDGITPQMFMTKEN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcatgaggatagtgtcaccggccgggtcaaaagcattttctttcagaatccg
acgaatttttttaaaattctcctgattgacattaccgccacgacgatcacctggaccgag
ccggacattgtcgtgaccggcacgtttggtgatatcaaagaagacgaaacttacacgttt
accggtcacgtaatcgaccatcccaagtatggtcaacagtttcaagcagataattatcat
gttgatcagccaaccaacaaaaccggtttgatcaattacctcagttcggataagtttccg
ggtatcgggccaaaaactgccgagaagatcattggtaagcttggggtagatgcgattaat
cagattctcgatgatccggcatcgcttgaaggacttggcatcaccgctgcaaagcgaaaa
atgctggttgacaatcttaagacgaatcaaggcatggaacgcgtcatcatcggactgaat
gattacggcttcaccagtaacatggcggggcggatttatcagcaataccaaaatgacgcg
cttgaagtgattaagcaaaatccatatcaactcatcaatgatattgccggcatcgggttt
acccgtgcggatcaaattgccgccaaattgaatatcgcaccggattcgcaattgcgtctc
ggcggagccgtcatggacacgttgcaacgcctgaccgatggcgaaggggacacttttgtc
gaactgcgcacgctcgttacccagacacttgatttgttagagcgggcacggaatattgcc
gttaagccagatgacgttggtcaggccattgtgacccttgctaaagataatgagctggtc
gctgaggacaaacggatctttcctaaacggctctatgattcggagtggcagattgctcgt
cagttgaagggattagccgaagcaggcgcgaaggctgaagaacctgagctgccagatatt
gaaaaaacgttagccgaagtacaggcagacaccggcattgcctacgatgatgtccaaaaa
aaagcaattgtgacggcgttgcgatccccgatttttctattgacgggcggtcctggtacc
ggaaaaacgaccgtgacagatgggatcgtccgcacttatgcgcgactacatgatctttcg
ttagatgccaatcagtataactcggatgatccatttccaatcatgctggcagcgccgact
ggccgtgcagctaagcgaattagcgagacgacgcaattaccggccagtaccattcatcgg
ttattgggactaggtgtggatacgcaggattttgcgcctaatgatctgccggacgggctg
ttgattattgacgaaatgtcgatggtcgatacgtatttatttcgcacgctgttgaccgcg
cttcatcctggcatgcagattgtgctagtgggagataaggatcagcttcctagcgtcggt
ccgggacaggtttttgcggatcttttacgcagcggtgcattgccccaagccgcattaacc
catattcatcgccaagacgccgatagttcgatcattccgttagcccatgcggtgaacgcc
ggcaaacttcctgacgatttcacgcaaccacaagtggatcgcagttttttggcatgcgcg
cccaaccaagtgccggaggtcgtaggtcaagttgtgaagcgggcggccgtcaagcaattt
tcgatcgccgacattcaggtgttagcaccaatgtatcgcggaaccgcgggaattgatcgc
ctcaacccaatgttgcagaatattttgaatcctaaacgcagcgcgcggaccaaaaccgtt
cattttggcgacaccgagtatcgaatcggtgataaaatcctgcagctggtcaatgatcct
aaccagaatgtgtttaatggcgaaatcggccagattgtcgggatcacgttagccaaagaa
gcacccagcaaaaccgatgagctgacgattgactttgacggcaatgagatcacgtataag
cgtagcgattttagcaaaatcacgctggcctatgcgacgtcgatccacaaagctcaaggg
agcgaattcccgatggtgattttgccgctaaccttgcaaagtcggcgaatgttgcggcga
aacttgctttataccgccattacccgagcaaagtcatttctgattttggtgggtgaactt
gcagcttttgaaacggcggttggtgaagtggcagtgaatcggcatactgggttggttcag
cggttgcagcaggtgtttgacatcgaaggatcgcaaacggctgtcgaagaagctacggta
ccacaaccagcgttgccgcaagaacccacgcaaattgacacaaatggttccgactcggat
aatgaagttaggcctgccaaaacggcgccgcaccagttaacgccggcattagcagcctca
cagaaaattgatccgatgattggaatggatggtataaccccgcaaatgtttatgacgaag
gagaattaa
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