Lacticaseibacillus huelsenbergensis: LHUE1_002426
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Entry
LHUE1_002426 CDS
T09416
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03030
DNA replication
lhn03430
Mismatch repair
lhn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHUE1_002426 (dnaE)
03430 Mismatch repair
LHUE1_002426 (dnaE)
03440 Homologous recombination
LHUE1_002426 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhn03032
]
LHUE1_002426 (dnaE)
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_002426 (dnaE)
Enzymes [BR:
lhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHUE1_002426 (dnaE)
DNA replication proteins [BR:
lhn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHUE1_002426 (dnaE)
DNA repair and recombination proteins [BR:
lhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHUE1_002426 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WFB38880
UniProt:
A0ABY8DPG8
LinkDB
All DBs
Position
2626228..2629524
Genome browser
AA seq
1098 aa
AA seq
DB search
MTFTQLQVHSNYTLLHSPLALPDLIQAAKTRGYTAIALTDTNVVYGLVEFYRQAKAAGLK
PLLGMQIDIDDARLLVIAENNTGYHQLLKLSTQIMLAKTPVKFADLLPLTGLAAIALPDS
PFAEAVTTHHDEQAMAFLTALKAKQPASVYVGVDEAHLDSAIPAFIAAHQLEPLALGNVL
YRDPTDAFTQKVMVAIDEGSQLNFRDPVLTDAGEAWLKPPTDAAAPFAAAGLQTAVDHTA
DIAARADVTIDFKQPQLPHYQTPDQIPSKDYLTKLAKSGLDARFHGQPIPEAYQKRLQYE
LHVIIEMGFADYFLVVWDVMNYAHKVNIMTGAGRGSAAGSLVSYALAITEVDPIEYNLLF
ERFLNPARAQMPDIDLDIPDNRRGELIQYVHDKYGENHMAQIITFGTFGAKQAIRDVARV
FGLSQFESNTWSKAIPNLFHIDLKTAYEQSQPLKNLVADSPKNRMLFQTALALEGLPRHY
STHAAGIVLSEEPLTDTVALQPSGDGLEQTQVPKDDVEALGLLKMDFLGLKNLNILAAAS
HFVARDTGKPFDPKTIPLDDKPTLNLFARGDTNGVFQFESSGIKNVLRKLHPTAFEDVVA
VNALYRPGPMENIDTFIARKNGQEPIAYPDPALTEILKPTYGVLVYQEQVMQVANVMGGF
SLGEADLLRRAMSKKKSAVLAAEQDKFIEGAVKQGFPEETAKTVYAYIDRFANYGFNRSH
AVAYSKVAFWLAYLKVHYPAAFFAALMNASMNNLPKLRTYVQEAKARKVGLLGPDINASN
GGFKLSQGKIRFGLLSVKGMRRDFSEAIFTARQNGPFKNLRDLLQRLDPKWLKADNFKSL
ILAGAFDTFDANRAQTLANLDELINSVKLAGNDVGLFSMLAPKTIKVPEMSASERLEAEA
EVLGVYLSGHPVDKYAPLKTQYTLVSVSDLEEGQTVNILLLVRHIKRIRTKTGKPMAFVD
GQDATGNVSLTVFPNLYPTIEDLTTDMVVFVNGRVEKRHDDLQLVVNRIQDAQPLLASLP
SAELFIRLDAKDTALRTDLLKKLQAAHGTTPVITVDTATRESILLDKRYWVKADTTLVEA
LKSQFGANNVVLRTRQES
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttacccaattacaggttcatagcaattataccctattacacagcccattggca
ctgcctgatttgattcaggcagccaaaacaaggggttacacggccattgccttaaccgac
accaatgtggtttacggtctggtcgagttttatcgccaggcaaaagctgcagggctaaag
ccgttgctaggcatgcagattgatattgacgatgcccgcttgttagtcattgccgaaaac
aatacgggctatcaccaactcttgaaattatcgacgcaaatcatgctggcgaagacaccg
gttaagtttgctgatttattaccgctgactgggttggccgccattgcgctgccggattcg
ccatttgcggaggctgttacgacgcatcacgatgagcaggcaatggcgtttttaacggct
ttaaaagccaagcagccggcgtcggtttatgtcggtgtggatgaggcgcatcttgacagt
gctattccggcgtttatcgcagcgcaccagcttgaaccgctggcattgggcaatgttctt
tatcgtgacccaaccgatgcctttacgcaaaaagtcatggttgccattgatgaaggcagc
caattaaactttcgtgatccggttttaaccgatgccggtgaagcttggttaaaaccgcca
acagacgctgctgcaccgtttgcagcggctgggctacagacagcggtggatcataccgct
gacattgctgcccgtgccgatgtcaccattgactttaaacagcctcagctgccgcattac
cagacgccggatcagataccgtcgaaagattatttgaccaaactggctaaatccggtctt
gacgctcgttttcatggccagccgattccagaagcctaccagaaacgtttgcaatatgag
ctgcatgtcattatcgaaatgggctttgccgattattttctggtggtttgggatgtgatg
aattatgcgcacaaggtgaacatcatgaccggcgccggacgtggctcggcggctggctcg
ttagtgagttatgcgctggccattaccgaagtcgatccgattgaatataatctgctgttc
gaacgatttttgaatccggcacgggcgcagatgccggatattgatctggatattccagac
aaccgccgcggcgagttaattcagtatgtgcacgacaagtatggcgagaatcacatggct
cagatcattacttttggaacattcggggccaagcaggcgattcgtgatgttgcgcgggta
tttggcttaagtcagtttgaaagtaacacatggagtaaggcaatccctaatttgtttcac
attgatttgaagacagcttatgagcaaagccagccgctcaagaatttggttgccgactca
cccaaaaaccggatgctttttcagaccgcactggctttagaagggctgccgcggcattac
tccacgcatgcggcgggtatcgtgctgtcagaagagccattaaccgataccgtggccttg
cagcccagtggtgacggactcgaacaaacccaggtccccaaggatgacgttgaagcgtta
ggcttgttgaaaatggattttctgggactgaagaaccttaacattttggctgctgccagc
cattttgtggcgcgggataccggcaagccgtttgatcccaagaccattccgctggacgac
aaaccgacgttaaacttgtttgcgcgaggcgataccaatggggttttccagttcgagtcg
tctggcatcaaaaatgtcttgcgaaaattgcacccgactgcatttgaagacgtcgttgcg
gttaatgccttgtatcgacccgggccaatggaaaacatcgacactttcattgctcgcaaa
aacggccaggagccgatcgcttacccagatccggcgctgaccgaaatcctcaagccgacc
tatggcgtgctcgtttatcaggagcaggtcatgcaggttgccaacgttatgggcggcttc
agtcttggcgaagcggacttgttacgacgagcgatgagcaagaaaaagtccgcagtgctg
gcggcagagcaggacaagtttatcgaaggtgccgttaagcaaggctttcctgaagaaaca
gccaaaaccgtttacgcctacattgatcggtttgcaaattatggcttcaaccgttcacat
gctgttgcgtatagtaaggttgccttttggctggcttatttaaaagttcattatccggca
gcgttttttgccgccttgatgaatgccagcatgaacaatctgccaaaactgcgtacctac
gttcaagaagccaaggcccggaaagtcggtttgctaggccctgatattaatgccagcaat
ggcggttttaaattaagccaaggaaaaattcgttttggcctgttgtccgtcaaagggatg
cgccgcgactttagcgaagccatttttaccgcccgtcaaaatggcccgtttaaaaactta
cgcgatcttttacaacgattggatcccaagtggttaaaagctgacaactttaaatcattg
attcttgccggggcatttgatacgtttgatgcgaatcgggcgcaaacgctagccaatctg
gacgagttgattaattctgttaaattggcaggcaacgacgtcgggctcttttcgatgttg
gcgcctaaaacaatcaaagtgccggaaatgtccgccagtgagcggcttgaagccgaagcg
gaggttcttggggtttatctatccggacatccggttgataaatatgcgccgttgaaaacc
caatataccttggtgagcgtcagcgatctggaggaagggcagacggtgaacattttgctg
ctggtgcggcatatcaaacgaattcggacgaaaacaggtaaaccgatggcctttgtggac
ggccaggatgcaaccggcaatgtgtcactgacagtttttccgaacctgtatccgacgatc
gaagacttaaccacggatatggtggtattcgtgaacgggcgcgtggaaaagcgtcatgat
gatttgcagctggtggtaaatcggattcaggatgcacaaccgttattagctagcctgcca
agtgccgaattattcattcggctggacgcgaaggatacagctttgcgaaccgatttactg
aaaaaattgcaagccgctcatggaacaacacctgttatcactgtggacactgctactcgt
gaaagtattttgttagacaagcgttactgggtcaaggctgatacaacattggtagaagcc
ctgaagtcacagttcggcgccaacaatgtggtcctaagaacgcggcaggagtcctag
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integrated database retrieval system
