Lacticaseibacillus huelsenbergensis: LHUE1_002546
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Entry
LHUE1_002546 CDS
T09416
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_002546
Enzymes [BR:
lhn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHUE1_002546
DNA repair and recombination proteins [BR:
lhn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LHUE1_002546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF4124
Motif
Other DBs
NCBI-ProteinID:
WFB38995
LinkDB
All DBs
Position
complement(2761072..2764611)
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AA seq
1179 aa
AA seq
DB search
MGLQFILGDATRDHAQTMAAMIQEQLAADPQNQIFFLVPNHIKFEAEIDLLKRLRQLQQG
EADAYAQSRVQVLSFSRLAWFYLKNTPLYQQPRLDQASNTMLVAKILADRQDDLTIYAGE
AQHTGFVTQLADQLSELMIGRITAEDLMHTVSALAPGDRHRAKLRDLGIILDQYEAEIGP
YATTASLLSGLQQAMRTQDLSHTFIYLNDFNVFSASESALVETMLETAAEVTLGLVLNKP
YPLNPPVAPNLFLPAGRLYQRLYQKAKTLHVPIRPDQFAAPRQISRGMQQVANWWEANTD
LQPSTAPTSETAEQIHLAIATDPYQELRHVAQHIYRAVRHGARYRDFLILARRLEPYATV
IPAIFAEFSIPQFTDLQRPMKDHPLVVLMESLFAIQKHDYQYQDVMRLLHTELLLPEGMS
LAEFRDAVDTTDNHLVRTGIAGKQRWTQPAAWRYFQRNPDADDPQMDPEAAKTAQINAIK
TLIAQTVPTLLKQWQTAKTGAEAAGDLYRWLDANGVVDQLRAWRQTASDAGDLTRSRAHE
QAWTTFTALLDNYVTILGSAKFDREQFHELLAAGFASATYTQIPATLDAVVISETGLVRL
AKAKHVFVIGATNTAMPDVPTDDGVLNSEERQLLAAQLPDDRFLPEQGPATTLGDPFINY
LGFMAASDELTLSYPVQNAQENSENQASPYFQQMGNALHLTPTAWAPVSLTTPVETVLGS
PRAMLSDFVRAAGDAQQQKLPLGQAWQSVLAALKQTDLATLSRRLAGSLTYQNDPGQLDP
DLAIQLYGRDMNVSVSRLETYYLNHFEYFLKYGLLLQPRPEFELSPADTGSLFHAVLDRY
LTQLREEHVALADVDPAVIAAAIPPLVEDIASQPGYEILGSTHRMLYLTRRLSRLLIQVL
VNMRQQQQRSGFRPIRTELQFGRIGDTKGLPGLSWPLPHGGRVNVRGKIDRLDVYREPNA
RRFIIVDYKSTQHRFNDSDAYYGIALQMLTYIEAMTNVPIDPPFVPAGALYFHLQDPTLP
YTPTLEPVIERLKKFKYLGFLVANHGDELSAVDRTISPESGGASEVAPLGFKKDGSFNRS
QSNILTPDDLRAYLAHNQALIIDAATQILSGNIDLAPFQYGQSSEVVSRSDYQSIMLFDP
ATGFDHYHHVPKLKRKDVVNRLTTDPKQTPDSQKETPQS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcagtttattttaggtgacgcaacaagggatcatgctcaaaccatggcagcc
atgatccaggaacaactcgctgctgatccgcaaaatcagattttctttttagtgccgaac
catattaaattcgaagcagaaatcgatcttctcaaacgcttgcgccaattgcaacagggt
gaggcggatgcgtacgctcagagtcgggtgcaggtactgtcattttcgcgtctggcctgg
ttttatttgaaaaacacgccactttatcaacaaccacggcttgatcaggcaagcaatacc
atgttggtggccaaaattctggctgatcggcaagacgacttgaccatttatgccggtgaa
gcgcaacataccggtttcgtgacgcaacttgccgatcaattaagcgaattgatgatcggc
cgtatcactgccgaagatctgatgcatacggtatcggctttagctcccggtgatcggcat
cgcgcgaagttgcgcgatctggggatcattcttgaccaatatgaagcagaaattggccct
tatgccacgaccgcaagtttactgagtggcttgcagcaagccatgcgcacgcaggaccta
agccatacgtttatctatctcaatgattttaacgtattttctgcttctgagtctgcgtta
gtcgaaaccatgctcgaaacggccgccgaggtaacgctcgggttagtgctgaataagcca
tatccgcttaatccgccagttgctccgaacttatttttgcccgccggtcgactttaccaa
cggctttatcaaaaagcgaaaacgctgcatgttccgattcgcccggatcaatttgcggca
ccgcgtcaaatcagtcgcggcatgcaacaagttgcaaattggtgggaggccaatactgac
ttgcaaccatcaacagctccgacttctgaaaccgctgagcaaattcatctggccatcgcg
accgatccgtatcaggaactgcgccatgtggctcagcacatttatcgcgcagttcggcat
ggtgcgcgctatcgtgatttcctgattttagcacgacgattggagccttatgcaaccgtg
attccggcgatttttgccgaattttcgatcccgcagtttaccgatttgcaacggccgatg
aaggaccatccgctagttgtcttgatggaaagtctgtttgcgattcaaaaacacgattat
cagtatcaagatgtcatgcgtctgctgcacacggagctattgttgccggaagggatgtca
ctggccgaatttcgggatgcagtggacacaacggataaccacctagtgcggacgggcatt
gccgggaagcagcgctggacgcaaccagctgcatggcgctattttcagcgtaatcctgac
gccgatgacccgcagatggatccggaagctgctaaaaccgcgcagatcaatgcgattaaa
acgttgatcgcccaaaccgtcccaacgttgctaaaacagtggcagaccgcaaaaacaggg
gcggaggctgcaggtgacctgtatcgttggttggacgcaaatggcgttgttgatcaactg
cgcgcttggcgacaaactgccagtgacgccggtgatctgactcgcagccgcgcccatgaa
caggcgtggaccacttttaccgcgttattggacaactatgtcacgatcttgggcagtgcc
aaatttgaccgggagcagtttcacgaattgctggccgcgggatttgccagtgccacgtac
acccagatcccggcgacccttgacgcggttgttatttctgaaaccggattggtgcggcta
gcgaaggcaaaacatgtattcgtcattggtgcaaccaatacggccatgccggatgttccc
actgatgatggcgtgttgaacagtgaggagcgccaattgttggctgctcaattgccggat
gatcgcttcttgcctgaacagggaccggcaacgactttaggcgatccatttatcaactac
ctgggcttcatggcagcgtcagacgaattgacgttaagctatccggttcaaaacgcccag
gaaaacagcgaaaatcaggcctcaccttattttcagcaaatgggaaatgcactgcaccta
acgccaaccgcctgggcgccggtttcgctgacaacgccagtcgaaaccgttttaggcagt
ccgcgggcaatgttgagtgactttgtgcgcgctgctggtgatgcccaacaacaaaagctg
ccattgggtcaagcgtggcaaagcgttttggcggcgttgaaacaaaccgatttagcaacg
ttatcccgacgcctcgctgggagtctcacttatcagaatgacccggggcaacttgatccg
gatttagctatccaactttacgggcgggacatgaatgtgtcggtttcccggcttgaaact
tactatctgaaccactttgaatattttctcaagtacggcttgctcctgcaaccgcgcccg
gaattcgaactttcaccagccgacaccggcagtctgtttcatgcggtgctggatcgctat
ttgacccaactacgcgaagaacatgtggcactggcagacgttgacccagccgtcatcgct
gccgccattccgccacttgtcgaagacattgccagccagccgggctacgaaattctcggc
agcacgcatcgcatgctctatctgaccagacgtttaagccggctactgatccaagtactg
gtcaacatgcgccagcaacaacaacgcagtgggtttcgtccgatacgcaccgaattgcaa
tttggacgaatcggggacaccaaaggcttgccggggttatcctggccgttgccgcatggt
ggccgcgttaacgttcgcggcaaaatcgatcgcttagatgtttatcgtgaaccgaatgcg
cgccgctttatcattgttgactataagagtacccagcatcggtttaatgacagtgatgcc
tattacgggattgccttgcaaatgctgacgtacattgaagccatgacaaacgttcctatc
gacccgccgtttgtaccggccggcgcactgtatttccatcttcaggatccaacgcttcca
tacacgccaacattggaaccggtgattgagcggctcaagaaattcaaatatctgggtttt
ctggttgccaatcatggtgacgaactctccgcggtcgatcgcacgatttcacccgaaagt
ggcggcgccagcgaagttgctccgttagggtttaaaaaggatggcagcttcaaccgtagc
cagtcgaatattttaacgcccgatgatttacgcgcttacttggcacacaatcaagcactg
atcatcgacgctgccactcaaattctctccggcaatattgacctggcacctttccaatac
ggtcaatcctcagaagtcgtcagccgcagtgattaccaaagcatcatgctttttgatccg
gcaaccggctttgatcattatcatcatgttcctaaattaaaacggaaagatgtcgtcaat
cgcctcacaacggaccctaagcagacaccagattctcaaaaggagacaccgcaatcatga
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