Lacticaseibacillus huelsenbergensis: LHUE1_002571
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Entry
LHUE1_002571 CDS
T09416
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHUE1_002571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhn03400
]
LHUE1_002571
Enzymes [BR:
lhn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LHUE1_002571
DNA repair and recombination proteins [BR:
lhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LHUE1_002571
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WFB39019
LinkDB
All DBs
Position
complement(2786653..2787540)
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AA seq
295 aa
AA seq
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MLIGANVSMKGTKMLLGAVEEAASYDANTLQFYTGAPQNTRRKPTSEMRIPEGLAAMTKD
GISHTVIHAPYIVNLGNTKKPENFEFAVQFMREEVARADALHAYAMPFHPGAHVGAGPEA
AIKQIVKGLNRIIDPKQHVTIALETMAGKGTEIGRSFEELAAIIDGVTYNEKLRVTFDTC
HTNDAGYDVKDDFDGVLNEFDHVIGLDRLSVIHVNDSKNPRGSHKDRHANIGFGTIGFDA
LNRIAHHPALEKLPKILETPYVGPDKKHQVPPYGEEIKWLKSGHFQPEALRRLMD
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcggtgccaatgtcagtatgaaaggcacaaaaatgttgctaggggcagttgaa
gaagcggctagttatgatgccaatacactgcagttttatacaggtgcgccgcaaaacacg
cggcgcaaaccaacgagcgaaatgcgcattcctgaagggctggcggcgatgaccaaagac
ggcatcagtcataccgttattcacgcaccttatattgttaatcttggcaatacgaagaaa
cccgagaactttgaatttgcggtgcaattcatgcgggaagaagttgcccgggcggacgcg
ttacacgcttatgccatgccatttcatcccggtgcgcatgtgggcgccggtcctgaagcc
gccatcaagcaaattgtgaaaggcttgaatcgcattattgaccctaagcaacacgtcacg
atcgcgcttgaaaccatggcagggaaaggaacggaaatcggccgttcatttgaggaactt
gccgcaatcattgatggggtgacttataacgaaaagttgcgcgtgacttttgatacttgc
cataccaacgacgccggttatgatgttaaagatgattttgacggtgttttaaatgaattt
gatcacgtcatcggtttggatcggctgagtgtcattcacgtgaacgattccaagaatcca
cggggcagccataaggatcgccatgccaacatcggttttggaacaatcgggtttgacgct
ttaaatcgaattgcccatcatcccgcattggaaaagttacccaagatactcgaaaccccg
tatgtcgggccagataagaaacatcaggtcccgccatacggggaggaaatcaagtggctc
aaaagcggccattttcaaccggaagctttgcgccggttgatggattaa
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