Paucilactobacillus hokkaidonensis: LOOC260_100050
Help
Entry
LOOC260_100050 CDS
T03598
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lho
Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lho03032
]
LOOC260_100050 (gyrB)
03400 DNA repair and recombination proteins [BR:
lho03400
]
LOOC260_100050 (gyrB)
Enzymes [BR:
lho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LOOC260_100050 (gyrB)
DNA replication proteins [BR:
lho03032
]
Prokaryotic type
DNA Topoisomerases
LOOC260_100050 (gyrB)
DNA repair and recombination proteins [BR:
lho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOOC260_100050 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
DUF5647
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
BAP84585
UniProt:
A0A0A1GRJ3
LinkDB
All DBs
Position
4588..6531
Genome browser
AA seq
647 aa
AA seq
DB search
MSDKKETKAERAREYDASQIQVLEGLEAVRKRPGMYIGTTASQGLHHLVWEIVDNGIDEA
LAGFSDEIHVIVEKDNSITVTDNGRGIPVDIQAKTGKPALETVFTILHAGGKFGGGGYKV
SGGLHGVGASVVNALSTELDARVIREGKVYYIDFERGHVKTPMKVVDEKPDFNHGTIVHF
LPDPDIFQETTTFDIKVLTTRIRELAFLNKGLRISITDKRPEKPTSETFHYEGGIRHYVE
YLNENKDVLFDPPVYVEGKENGITVEVSLQYTDDYHSNLLTFTNNIHTYEGGTHETGFKT
ALTRVINDYGRKNGLLKTADDALSGDDVREGLTAVVSIKHPDPQFEGQTKTKLGNSDART
ATDHLFSETFNRFMMENPDVAHKIVDKGILASKARVAAKHAREVTRKKNGLEISNLPGKL
ADNTSKDPAISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASLDKILANEEI
RSLFTAMGTGFGDEFDVSKAKYHKLIIMTDADVDGAHIRTLLLTLFYRFMRPIVDAGYVY
IAQPPLYQVRQGKYMRYIDSDEELDQVMGSLQPSPKPVIQRYKGLGEMDAEQLWETTMDP
DKRRLLRVSSEDAIEADHVFSMLMGDKVLPRREFIEKNAVYVQNLDL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgataaaaaagaaactaaagcagaacgtgctcgtgaatatgatgccagtcaaatt
caggtgcttgaaggattagaagctgtcagaaaacgacctggtatgtacattggaacaact
gcatcgcaaggattgcatcatttagtttgggaaatcgttgataatggtatcgatgaggcc
cttgctggatttagtgatgaaattcatgtaattgttgaaaaggataatagtattactgtc
accgacaatggccgtgggattccggttgatattcaagctaaaaccggtaaaccagcattg
gaaactgtatttacgattttacatgccgggggtaagtttggcggcggtggatataaagtt
tctggtggtttacacggtgttggtgcatcagttgttaatgctttgtcgactgagctggat
gctcgcgttatccgagaaggcaaagtgtactacattgattttgaacgtgggcatgtcaaa
acaccaatgaaagttgttgatgaaaaacctgattttaatcacggcacaattgtccatttc
ttgccagatccagatatctttcaggaaacaacaacatttgatattaaggttctaacaact
cggattcgggaactggcttttttgaataagggtttaagaatttcaattactgataaacgg
ccagaaaagccaaccagcgaaactttccattacgaaggtggaattcgccattatgtcgaa
tatttgaacgaaaataaagatgttttatttgacccaccagtatatgttgaggggaaagaa
aacggaattacagttgaagtatcattgcaatacactgatgattatcatagtaatttgttg
actttcactaataatattcatacctatgagggtggaactcatgaaactgggtttaagact
gctttaactcgtgtaattaatgattatggtcgcaagaatggactattaaaaacagccgat
gatgctttatctggtgatgatgttcgtgaaggattgactgcggttgtttcgatcaaacat
ccggacccacaatttgaaggacaaacaaaaacaaaactgggtaattcagatgctagaaca
gctactgatcacttattctcagaaacgtttaatcgattcatgatggagaatcctgatgtt
gcacataaaattgttgataaagggattctagcttctaaagcacgggttgcagctaaacat
gcgcgtgaagtaacacgtaaaaagaatggactagagattagtaatttacctggtaaatta
gctgataatactagtaaagatccagcaatttcagaattgtttatcgtcgaaggtgattca
gccggtggttctgctaaacaaggaagatcacgattgacacaagcgattttgccaattcgt
ggaaaaattctgaatgttgaaaaagctagtctagataaaattttagccaatgaagaaatt
cggtcattgtttacagcaatgggaactggttttggggacgaatttgatgtttccaaggct
aaatatcataaattgattattatgacggatgccgatgttgatggtgcgcatattcgaact
ttactactaacactattttatcgatttatgcgtccaattgttgatgctggatatgtatat
attgcacagccaccgctgtatcaagtgcgccaaggtaaatatatgcgctacattgattct
gatgaagagttagaccaagttatgggctcattacagccatcaccaaagcctgttattcaa
cgatataaaggacttggggaaatggatgccgaacaactatgggaaacgaccatggatcct
gacaaacggcgactacttcgagttagttccgaagatgcaattgaggctgatcatgtcttt
tcaatgttaatgggtgacaaagtgttaccacgacgtgaatttattgaaaaaaatgcagtt
tatgtccaaaacttagatctatag
DBGET
integrated database retrieval system
