Paucilactobacillus hokkaidonensis: LOOC260_100060
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Entry
LOOC260_100060 CDS
T03598
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lho
Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lho03032
]
LOOC260_100060 (gyrA)
03400 DNA repair and recombination proteins [BR:
lho03400
]
LOOC260_100060 (gyrA)
Enzymes [BR:
lho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LOOC260_100060 (gyrA)
DNA replication proteins [BR:
lho03032
]
Prokaryotic type
DNA Topoisomerases
LOOC260_100060 (gyrA)
DNA repair and recombination proteins [BR:
lho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOOC260_100060 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
7tm_6
Motif
Other DBs
NCBI-ProteinID:
BAP84586
UniProt:
A0A0A1GW36
LinkDB
All DBs
Position
6559..9120
Genome browser
AA seq
853 aa
AA seq
DB search
MAEQDLPSRITDVNLSGEMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYGMSELGVT
PDKPYKKSARIVGDVMGKFHPHGDSAIYESMVRMAQDFSYRYMLVDGHGNFGSVDGDGAA
AMRYTEARMSKIAVEMLRDINKDTVNFVENYDGTEKEPSVLPARFPNLLVNGASGIAVGM
ATNIPTHNLSEVISAIHILMDNPEATTADLMEAVPGPDFPTGGIVLGKSGIRKAYETGRG
TIIVRAKVDIEEKKNGRQRIIATEIPYMVNKAKLIERIADLARDKRIEGITDVNDESDRE
GMRIVIDVRRDASAEVILNNLYKMTLLQTSFSFNMLAIVKGTPKVLGLKQILEYYLEHQE
EVVRRRTEFELKKAQARAHILEGLRIALDHIDAIINTIRSSQTSEIAKSQLMQNYSLSDR
QAQAILDMRLVRLTGLEREKVEDEYQKLMESISDFKDILKHTERINQIIYDELLEIQSKF
GDARRTELQVGDVTSLEDEDLIEEENVIVSLTHNGYIKRLAVDEFKAQHRGGRGVQGMGV
HDDDFIEQLISTSTHDRLLFFTSAGKVYSMKGYEVPEYGRSAKGIPVINLLGIDADEKIS
AVINVSHETNDHDKYLFFTTLHGTVKRTPVAAFENIRSNGLKAITLKENDQLMGVSIIEE
SQKMIIGTHLGYAVSFKGADVRSMGRSASGVRGIRLRDNDYVIGVDLLTQDSNVFIISER
GFGKQTPASEYPIKGRGGKGIKTANVTEKNGPLVGLATVTGAEDIMLVTDKGVIIRFGIE
TVSQTGRATLGVHLIKMDDETHVATMTKVAKEEESEDETEAGSSENEASEQNESDTIASK
NTISEQDNPEKNE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaacaagatttaccaagtcggattaccgacgtcaatttatctggtgaaatgcgg
acatcctttttggattacgcaatgagtgttattgtcgcacgggcacttccagatgttcgt
gatggattgaaacccgttcatcgtcggattttatatgggatgagcgaattaggtgtaaca
ccagacaagccatacaaaaagtcagccagaattgttggtgatgtcatggggaaatttcat
ccgcatggggattcagcaatttacgaatcaatggttcggatggcacaagactttagttat
cgttacatgctagttgatggacatggtaactttggatctgtcgatggtgatggtgctgct
gcaatgcggtatacagaagcacgaatgagcaagattgcagtagagatgctgcgtgatatc
aataaagataccgttaattttgttgagaattatgatggaacagaaaaagagcctagtgtg
ttaccagcacggttccctaatctattagttaatggtgcctctgggattgctgttgggatg
gctactaacattccaacacataacttgtcagaagttattagtgctatccacattttaatg
gataatccagaagcaactactgcagatttaatggaggcagtgcctggtcctgactttcca
actggtgggatcgtattaggtaagtctggtattcgtaaggcttacgaaactggtcggggg
accattattgtccgtgccaaagttgatattgaagagaagaaaaatggtcgtcaacgaatt
attgcaactgaaattccatatatggttaacaaggcgaagttaattgagcgaattgctgac
ttagctcgtgacaaacgaattgaaggaattacagatgttaacgatgaatccgatcgtgaa
ggaatgcggattgtaattgatgtccgtcgagatgctagtgcggaggttattttaaataat
ctctacaaaatgacgttgctacaaacttcatttagtttcaacatgctagcaatcgttaaa
gggactcctaaagtcttaggattgaagcagattttagagtattatcttgagcatcaagaa
gaagtagtgcgtcgtcgaacagaatttgagttgaaaaaggcgcaagcacgagcacatatt
ttggaagggttacgaattgcgcttgatcatattgatgcaatcattaatacgattcgtagt
tcacaaactagtgaaattgctaaaagtcagttaatgcaaaattatagcttatctgatcga
caggcacaggctatcttagatatgcggttggttcgattaactggtttggaacgtgaaaaa
gttgaagatgagtaccaaaaattaatggaatcaatttcagactttaaggatattttgaag
catacagagcggattaatcagatcatctatgatgaattactagaaattcaatcaaaattc
ggcgatgcgcgccgaacagaactacaagttggggatgttaccagcttggaagatgaagac
ttgattgaagaagaaaacgtaattgtgtcattaacccataatggttacattaaacgattg
gctgttgatgaatttaaggcacagcatcgtggtggccgtggggttcaaggaatgggtgtt
catgatgatgatttcattgagcaattaatttcaacatctacacatgaccgattacttttc
tttaccagtgcaggtaaagtttactcgatgaagggttatgaagtgcctgagtacggtcgt
tcagccaagggaattccagttattaatttattaggaatagatgctgatgaaaagatatcg
gctgttatcaacgtttcacatgaaacaaatgatcacgataaatatcttttcttcactacc
ttgcatggaacggttaaacgaacaccggtagcagcgtttgaaaatattcgtagtaatggt
ttaaaggccattaccctgaaagaaaatgatcagttgatgggtgtttcaattattgaagaa
tcccaaaagatgattattggaactcatttgggctatgcagtcagttttaagggcgccgat
gtacgttcgatgggccgttctgctagtggtgttcgtggaattcggctacgtgacaacgat
tatgtgatcggggttgatttactaacacaagacagtaatgtctttataattagtgaacgt
ggttttggtaaacaaactcctgctagcgaatatccaattaaaggacgtggtggtaaagga
attaaaactgccaatgttaccgaaaaaaatggtcctttggtcggattagctactgtaaca
ggtgctgaggatattatgctggtaacggataaaggtgtaatcattcgttttggcattgag
actgtttcacaaactggtcgcgcaaccttaggggttcatttgattaagatggatgacgaa
acccacgtggcaaccatgactaaggttgctaaggaagaagagtcagaagatgaaactgaa
gcaggttcaagtgaaaatgaagcttcagagcaaaatgaatcagatacaatagcaagcaaa
aatacaatctcagaacaagataatccagaaaaaaatgaataa
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