Paucilactobacillus hokkaidonensis: LOOC260_105440
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Entry
LOOC260_105440 CDS
T03598
Symbol
rpsC
Name
(GenBank) 30S ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LOOC260_105440 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lho03011
]
LOOC260_105440 (rpsC)
Ribosome [BR:
lho03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LOOC260_105440 (rpsC)
Bacteria
LOOC260_105440 (rpsC)
Archaea
LOOC260_105440 (rpsC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KH_KhpA-B
KH_5
KH_1
Motif
Other DBs
NCBI-ProteinID:
BAP85101
UniProt:
A0A0A1GXC0
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All DBs
Position
564310..564981
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AA seq
223 aa
AA seq
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MGQKINPTGFRVGVIRDWQAKWYAEKDFATFLNEDLRIRKYITKRLAEASVSTVEIERAA
NKVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESIA
RQLEGRVAFRRAMRGAMQRTMRSGAKGIKTQVSGRLNGADMSRVESYSDGTVPLHTLRAD
IDYSWDEAHTTYGQLGVKTWIYRGEILPEKKGVQTNVKEQGGK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgggtcaaaagattaatccaactggattccgtgtcggtgtcattcgtgactggcaagct
aaatggtatgcagaaaaagattttgctactttcctaaacgaagacttacggatccgtaaa
tatatcacaaaacgacttgctgaagcctctgtttcaaccgttgaaattgaacgtgctgct
aataaagttaacgtttcaattcatacagccaaaccaggaatggttattggtaagggtggt
tcagaagtagaagcacttcgtaaagaattaaacaaacttacaggtaaacgagtacacatt
aacattgtggaaattaaaaagcctgatttggatgctcacctagttggtgaaagcattgct
cgtcaactcgaaggacgggttgcattccgtcgcgcaatgcgtggagcaatgcaacgcaca
atgcgttctggtgctaagggtattaagacgcaagtttctggtcgtttgaatggagccgac
atgtcacgtgttgaatcatattcagatggaacggttcctctgcatacgcttagagctgat
atcgattattcatgggatgaagcacatacaacttatggacaacttggtgttaaaacttgg
atttaccggggagaaattcttcctgaaaagaagggcgttcaaacgaacgttaaagagcaa
ggagggaaataa
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