Paucilactobacillus hokkaidonensis: LOOC260_106100
Help
Entry
LOOC260_106100 CDS
T03598
Symbol
cydD
Name
(GenBank) ATP-binding cassette, subfamily C, bacterial CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOOC260_106100 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lho02000
]
LOOC260_106100 (cydD)
Transporters [BR:
lho02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LOOC260_106100 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_29
RsgA_GTPase
SMC_N
AAA_22
MobB
Mg_chelatase
AAA_23
PduV-EutP
MMR_HSR1
AAA_16
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAP85167
UniProt:
A0A0A1GSC6
LinkDB
All DBs
Position
623247..625004
Genome browser
AA seq
585 aa
AA seq
DB search
MIDRRIFNLPGAKKIVGILGLLVFIQGFMILFQGKFLAESIVGLWKRQPLTSITTTTILF
AVVFLLRHILTLLKNRVVAPFVNKTAQSLRAQLMAKLFKIGPAATAAKGTGSLVTMAVDG
VDQIQNYLQLVFIKVFDMMVIPWILLVYLFFIRWQESVFLLLIYPIIILFMIILGFAAQA
KADQQYAGYQRLSNNFVDTLRGLPTLKQLGLSKQYSKNVFSVSEDYRKQTLSVLTIAVLS
TFALDFFTTLSIAVVAVFLGLGLIKGSIALLPALIMLVLSPEYFLPIRNFANDYHATLDG
KNAMTAIFEVLDLPEIKDQDQLKKLPAGWQADDELTFEHVDVSYQDVDRDPNQLSDATLH
DISFSVKGYQKIGLIGKSGSGKTTLIDTLSGFLTPQVGSGTIKVNQQVLSHLAQDSWKQN
FLYIPQSPYLFHDTIENNIRFYTPTATSEQVQTAAGQAGLSDWLASLPTGLQTKIGEGNR
GVSGGQAQRIALARAFLDQQRKILLFDEPTAHLDIETEAELKEAMTPIFANHLVFFATHR
LHWLNQMDYVLVLDEGKLVQQGTPDELSKQPGAYAQLVSDMGGGQ
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcgtcgaatcttcaatttaccaggagcaaaaaaaattgttggtattttgggg
ttattagtttttattcagggatttatgatcctatttcaagggaaatttctggctgagagt
atcgtcggtctttggaaacggcagccattgactagcatcacgacgaccacaattttattt
gcggtcgtttttttgctacgccatattctaacattgctcaaaaatagagtagtagcacca
tttgttaacaaaacggcgcagtctttgcgggcacaattaatggcgaaactatttaaaatt
ggtcccgctgcgacagccgcaaagggaactggtagtttagttacaatggcggttgacggt
gtcgaccaaattcaaaattacctgcaattagtatttatcaaagtattcgatatgatggtg
attccatggattttattggtttatttgttttttattcggtggcaagaatctgtgttcctg
ttattaatttatccaatcatcattttatttatgattattttgggatttgctgcgcaggct
aaagccgaccaacaatatgccgggtaccaacgtttatccaataattttgtggatacctta
cgtggattgccaactttaaagcaactaggtttatcaaaacagtattccaaaaatgttttt
tctgttagtgaggattatcgtaaacagacactatctgtgttaacgattgcggttttatca
acctttgcattagattttttcacgacattatcgattgctgttgtggccgtatttttaggg
ctaggtttgattaaagggagcattgcattgttgcctgcactaattatgttggtgctgtca
ccagaatactttttgccaatcaggaactttgccaatgattatcacgctactctggatggt
aaaaatgcaatgacagccatttttgaggtattagatttacctgaaattaaggatcaggat
caattgaagaagctgccagcgggctggcaagctgatgatgaattaacgtttgaacatgtg
gatgtttcgtatcaagatgttgaccgtgatccaaaccaattaagtgatgcgacactgcat
gacattagcttttcagtaaaaggctatcaaaaaattgggctaatcggtaaatctgggtct
gggaaaacaaccttaattgatactttaagcgggtttttaacgccgcaagtgggatccgga
acaatcaaggttaaccaacaagtgctatcgcatttggcacaagatagttggaaacaaaat
tttctgtatattccacaatcaccatatttatttcatgacacaatcgaaaacaatattcga
ttttatacaccgactgccacgtctgaacaggttcagacggctgctgggcaagcaggcttg
agtgattggttggccagcctaccaactggattacaaacgaagattggtgagggtaaccgc
ggtgtgagtggtggtcaggcacaacggattgcactggctcgtgcatttttggaccagcaa
cgtaaaattctactgtttgatgaaccaacagcgcatttggatattgaaactgaagctgaa
ttaaaggaagccatgactccgatctttgctaatcatttagttttctttgcaactcacaga
ctgcactggttaaatcaaatggactacgttttagtcttagacgagggaaaattggtccag
cagggcacacctgacgaactaagtaaacaaccgggcgcctatgcccaactagttagtgat
atgggaggtgggcaataa
DBGET
integrated database retrieval system
