Paucilactobacillus hokkaidonensis: LOOC260_107580
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Entry
LOOC260_107580 CDS
T03598
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho02010
ABC transporters
lho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOOC260_107580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOOC260_107580
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lho01002
]
LOOC260_107580
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lho02000
]
LOOC260_107580
Peptidases and inhibitors [BR:
lho01002
]
Cysteine peptidases
Family C39
LOOC260_107580
Transporters [BR:
lho02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LOOC260_107580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_29
AAA_22
RsgA_GTPase
AAA_21
DUF815
G-alpha
AAA_16
AAA_15
Peptidase_C39_2
AAA_24
DUF87
ABC_ATPase
MMR_HSR1
AAA_28
AAA_33
AAA_18
MobB
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
BAP85298
UniProt:
A0A0A1GWQ1
LinkDB
All DBs
Position
767093..769270
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AA seq
725 aa
AA seq
DB search
MTFIWNKIKFKYVPQVDERDCGVAALDMVLEAYHSDYSLASLRELAKTDMEGTTALGIVR
AAEQIGFETQVVKADMSLFDLDDIPYPFIAHVIKPGGLLHYYTIFSKTSKCVILGDPDPS
VGLIRMSKKQFQGEWDGVAIFLAPLPEYHPKKESKRNLFALIPLLLKQRLLVTQIILASL
LVTLISIVGSYYLQGIIDTYIPGGLKNTLVIISIGIITAYVIQQFLSFAENYLLMVMGQR
LSIDIILGYIRHIFELPMKFFGTRRTGEIVSRFTDASQIIDALASTIISLFLDVGIVVIV
GIVLAFQNINLMLLTLISIPLYAIIIFVFVGSFDKLNNDRMESNAVLSSSIIEDIDGIET
IKSLNSEQTTYRKIDREFVDYLKKSFKYEKLSITQEALKEGLQLVLNVFVLWFGSTMVID
GKMTLGQLVTFNALLSYFTTPLQSIIGLQTKLQAAKVANNRLNEVYSVDSEFTKVSAFNE
KPKSLTNSEITLTNVKFRYGFGNYALDDISLTIKAGAKIALVGASGSGKSTLVKLLVRFF
ESESGQIRFGQIPLNEINQKKLRATINYLPQEPYIFSGTIYENLLLGCSDKNVGIQTINN
ALEIAAIKDDIEAMQLGLETPLSADGSGISGGQKQRIAIARAVLADTPVMIMDESTSNLD
LITERKIIGNLLAFTNKTIIFVAHRLTIAEMVDDIYVMNHGKVIEHGSHEKLRNAGGFYS
KLLND
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacttttatttggaataaaataaaatttaagtacgtgcctcaagtcgatgaacgagat
tgtggtgttgcagctttagatatggtactagaggcatatcattcagattattcattagcg
tctttaagagaattagcaaaaacggatatggaaggaaccacagctttaggaattgtaagg
gcagctgagcaaattggatttgaaactcaagtggtcaaggctgatatgtcattatttgat
ttggatgatattccgtatccgttcattgctcatgttattaaaccgggcggtctccttcat
tactacactattttttcaaagaccagtaagtgtgttattttgggtgatccagatccttca
gttggtctgatcagaatgagcaaaaagcagtttcaaggtgaatgggatggggttgccatc
tttttagcacctttgcctgaatatcatcctaaaaaggaatccaaaagaaatttatttgct
ttgattccattattattgaaacagcgattgttagtaactcaaataattttggcatcatta
ttggttacactaatcagtatcgtgggttcatattatctgcagggtatcattgatacatat
attcctggtggacttaaaaatacattagtaattatatctattggcattattacggcgtac
gttatacagcagtttttatcatttgcagaaaactatctattaatggtgatgggacaaaga
ttatccattgatataattttagggtatatccgtcacatctttgaattgccaatgaaattc
tttggaaccagaagaactggggaaattgtttctagatttacagatgctagccaaatcatt
gatgctttagcaagcacaattatttctttatttttagatgttggaattgttgttatagta
ggaattgtgttggcgtttcagaatattaatttgatgctcttaacattaatttcaatacca
ctgtatgccatcattatttttgtgtttgtcggtagttttgacaaattaaataatgatcgg
atggaatcaaatgccgttttgagttcatcaatcattgaggatatagacggaatagaaacg
attaaatctttaaatagcgagcagaccacctaccgaaaaattgatcgtgagtttgtggat
tatttgaaaaaatcatttaaatatgaaaaattaagtatcacacaagaagcactcaaagaa
ggattacagttggtactcaatgtatttgtactctggtttggttcaaccatggttattgat
ggaaaaatgactttaggtcagctggttactttcaatgcgttattaagttatttcacaact
ccgcttcagtcaataatcggattacaaactaaattgcaagcggccaaggtggctaacaat
cgactcaacgaagtttattcagtagattctgaatttactaaagtttccgcgtttaatgaa
aaacctaagtcattgacaaattcggaaattacactaacaaatgttaaattcaggtatggt
tttggcaattatgcgttagatgatatttcacttactattaaagcgggtgccaaaattgct
cttgtaggtgctagtggttctggtaaatctactttggtgaaattattagttagatttttt
gaatctgagtccggccaaataagatttgggcagataccattaaatgaaattaaccaaaag
aaattgagagcaaccataaattatttgccccaagaaccatatatattttctggaacgatt
tatgaaaatttattacttggttgcagtgataaaaatgtaggaatccaaacaattaataac
gcgttagaaattgcggcaatcaaagatgatatcgaagcaatgcagttgggcttggaaacg
ccactctcagcggacggcagtggtatctcaggtgggcaaaagcagcgtattgcaattgct
agagcagttttagctgatacaccggttatgattatggatgaatctacaagtaatttagat
ttaattacggaacgtaaaataattggaaatttattagctttcacgaataaaacaattatt
tttgtcgctcatcgtttaaccattgcagaaatggttgatgatatttacgtaatgaaccac
ggtaaagttattgaacatggttcacatgaaaaattgcgtaatgcaggtggcttttattcg
aaactattaaatgattga
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