Paucilactobacillus hokkaidonensis: LOOC260_110170
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Entry
LOOC260_110170 CDS
T03598
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOOC260_110170 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lho03400
]
LOOC260_110170 (xseB)
Enzymes [BR:
lho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LOOC260_110170 (xseB)
DNA repair and recombination proteins [BR:
lho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LOOC260_110170 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Trimer_CC
KxDL
Perilipin
ABC_tran_CTD
NNH6
Prefoldin
Motif
Other DBs
NCBI-ProteinID:
BAP85556
UniProt:
A0A0A1GYJ8
LinkDB
All DBs
Position
1005029..1005280
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AA seq
83 aa
AA seq
DB search
MAEKMSFETQLKSLQTIVDQLEQGDIPLEEALKQFQTGVELSQKLQKTLDNAEKTLTKLM
DDDGQEVLFDQPKKEEGQANNDD
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaatgagctttgaaacacaattaaaaagtttgcagacaatcgttgatcaa
ttggagcaaggtgatattccattagaagaagcattaaaacaatttcaaactggagttgaa
ttgagtcaaaaattacaaaaaacgttagataatgccgaaaaaacactgactaaattgatg
gatgatgatggacaagaggttctgtttgatcaacctaaaaaagaagagggccaagcaaat
aacgatgactag
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