Paucilactobacillus hokkaidonensis: LOOC260_111400
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Entry
LOOC260_111400 CDS
T03598
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
lho
Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lho03032
]
LOOC260_111400
03036 Chromosome and associated proteins [BR:
lho03036
]
LOOC260_111400
03400 DNA repair and recombination proteins [BR:
lho03400
]
LOOC260_111400
DNA replication proteins [BR:
lho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LOOC260_111400
Chromosome and associated proteins [BR:
lho03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LOOC260_111400
DNA repair and recombination proteins [BR:
lho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LOOC260_111400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BAP85679
UniProt:
A0A0A1GXS6
LinkDB
All DBs
Position
complement(1136725..1137000)
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AA seq
91 aa
AA seq
DB search
MANKAELVNDVASATGLTKKDATAAVDAVFGSVQASLAKGEKVQLIGFGNFEVRQRAARK
GRNPQTGQEIQIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcagaattagttaacgacgttgcttcagcaactggtttaacaaagaaa
gatgcaactgcagcagttgacgcagtcttcggttcagtacaagcatcattagctaaaggt
gaaaaagtacaattgattggcttcggtaactttgaagttcgtcaacgtgctgctcgtaag
ggacgtaatccacaaactggacaagaaatccaaatccctgcaagcaaagtaccagcattt
aagccaggtaaggctttaaaggatgctgttaaataa
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