Paucilactobacillus hokkaidonensis: LOOC260_111420
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Entry
LOOC260_111420 CDS
T03598
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LOOC260_111420 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lho03011
]
LOOC260_111420 (rpsA)
Ribosome [BR:
lho03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LOOC260_111420 (rpsA)
Bacteria
LOOC260_111420 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
DUF2110
RNase_II_C_S1
CvfB_2nd
TOBE_2
Motif
Other DBs
NCBI-ProteinID:
BAP85681
UniProt:
A0A0A1GYY8
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All DBs
Position
complement(1138629..1139843)
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AA seq
404 aa
AA seq
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MAENEDRNDLLNALNSVEEVKVGDVVKGEVLAVDDDRQAIVGIEGAGVEGVVPAKELSTK
PVEDIKDQVKVGDVLDLVVISKIGNDKENGSYLLSHRRLEARKVWDEIQQKFEAGETITA
EVSQVVKGGLVVEAGVRGFVPASMITDHFVEDLNQFKGQTLEFQIIEIEPSENRLILSHK
AIVKAQHAEAAKKLFATLQPGQTVEGTVARMTSFGAFVDLGGVDGLVHVSEIAYERVEKP
SDVLKTGQKVQVKVLSVDPDRERISLSIKQTLPGPWDDIAEKAPEGTVLTGTVKRLTSFG
AFVEVFPGVEGLVHISQISHKHIATPADVLTPGQEVQVKVLEVHPEAQRLGLSIKALEEK
PQASESHERSHHQSNNVSTDAPEEESGFTLGDIIGKELKNSQEK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgaagatagaaacgacttattaaatgcgttaaatagtgtcgaagaggta
aaggttggggatgttgtcaagggtgaagtacttgctgttgatgacgatcgtcaagcaatt
gttgggattgaaggagcaggtgtcgaaggtgtagtacctgctaaagaattatcaacaaag
ccagttgaagatattaaagaccaagttaaagttggcgatgtgcttgacttagtggtaatt
tctaaaatcggaaacgataaagaaaatggaagttatttattatcacatcgtcgcctagaa
gcccgtaaagtatgggatgaaatccaacaaaaatttgaagcaggcgaaacaattactgct
gaggtatcacaagtcgttaagggtggtttagtagttgaggccggagtacgtggattcgtg
cccgcatcaatgattacagatcattttgttgaagacttgaatcaatttaagggtcaaaca
cttgaatttcaaattattgaaattgaaccaagtgaaaaccggttaattttatcgcataag
gcaattgttaaggcccaacatgcagaagcagctaaaaaattatttgctactttgcaacca
ggccaaacagttgagggtacagtagcacggatgactagtttcggtgcgttcgttgattta
ggtggtgtggatggattagttcatgtctctgaaattgcgtatgaacgagttgaaaaacct
tctgatgtcttgaagacaggtcaaaaggtacaagttaaagttttgtctgttgatccagat
cgtgaacgaatttcactttcaatcaagcaaacattgcctggaccttgggatgatattgct
gaaaaagcacctgagggcactgtattaactggaacggttaagcgattgactagttttggt
gcatttgtggaggtcttccctggtgttgaagggttagttcatatttcacaaatttcacat
aagcatattgctacacctgccgatgtattaacaccaggtcaggaagttcaagttaaggtc
ttagaagttcatccagaagcacaacgattgggattatcaatcaaggcattggaagagaaa
cctcaagcatctgagagccatgaacgatcacatcatcaatcaaacaatgtttctactgat
gctcccgaagaagaaagtggttttactctcggagatatcatcggaaaagaattaaagaat
agtcaagaaaaataa
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