Paucilactobacillus hokkaidonensis: LOOC260_111980
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Entry
LOOC260_111980 CDS
T03598
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
lho
Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lho03021
]
LOOC260_111980 (nusA)
03009 Ribosome biogenesis [BR:
lho03009
]
LOOC260_111980 (nusA)
Transcription machinery [BR:
lho03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LOOC260_111980 (nusA)
Ribosome biogenesis [BR:
lho03009
]
Prokaryotic type
rRNA transcription factors
LOOC260_111980 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAP85737
UniProt:
A0A0A1GU03
LinkDB
All DBs
Position
complement(1196204..1197328)
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AA seq
374 aa
AA seq
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MNKELVEALDALEKEKGIKKEVVVDALEAALVSAYKRNYGQAQNVEVDFDDKKGNIKIYA
VKKVVEEVEDAQLEVSLEEAVKINRGYELDDEIRFEVTPQNFGRIAAQTAKQVIMQRVRE
AERGVIYEQYSQYENEIVTGEVERQDSRFTYISLGNGNVEAVMSSQDQMPNENYKIHDRI
QVFVTKVENSTKGPQVFVSRTAPELLKRLFEKEVPEIYDGVVEIVSIAREAGDRAKIAVR
SNDPNIDAVGTCVGPRGQRVQVIVNELGGENMDIVEWVDDPAQYIANALNPAEVLDVIFD
EENERACTVIVPDYQLSLAIGKRGQNARLAARLTNFKIDIKPESEISDNQSADGQDAATD
EEVEPQTTDTEDDE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaattagtcgaggctcttgatgccttagaaaaagagaaaggtatcaagaaa
gaggttgttgttgatgctcttgaagcggcattagtttcagcctataagcgtaactatggc
caggcacaaaatgttgaagtcgattttgatgacaaaaagggcaacatcaaaatttatgct
gtaaaaaaagtagttgaagaagttgaagatgcccagcttgaagtgagtcttgaagaagca
gtcaagattaatcgtggttatgaattagatgatgaaattcggtttgaagtgacgccacaa
aacttcgggcgtattgcggctcagacagctaaacaagttatcatgcaacgagttcgtgaa
gcagagcgtggtgtgatttatgaacaatacagtcaatatgaaaatgaaattgttacgggc
gaggttgaacggcaagacagtcgtttcacatatatcagcttgggcaatggtaatgtagaa
gctgtaatgagtagccaggaccaaatgccaaacgaaaattacaaaatccatgatcgaatt
caagtatttgtgactaaggttgaaaatagtactaaaggaccacaagtttttgttagtcgg
acggcaccagagttactgaagcgcttatttgaaaaagaagtgcctgagatttacgatgga
gttgttgaaattgtttcgattgcacgtgaagctggcgatcgtgctaaaattgctgtaagg
tctaatgaccctaacattgatgccgttggtacttgtgttggtcctcgtggacagcgtgtt
caagtaatcgtcaatgaattaggtggcgaaaacatggacattgttgaatgggtcgatgat
ccagctcaatatattgctaatgcgttgaatccagcagaagtgttagatgttatttttgat
gaagaaaacgaacgagcatgtacggtgattgttccagattatcaactatcattagcaatt
ggtaaacgtggacaaaacgcacgacttgcggctcggttgacaaatttcaaaattgatatt
aaacctgagtcagaaattagtgataatcaatctgcagatggacaagatgcagcaactgat
gaagaagttgaaccacaaacaactgatactgaagatgacgagtag
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