Paucilactobacillus hokkaidonensis: LOOC260_115680
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Entry
LOOC260_115680 CDS
T03598
Name
(GenBank) recombinase RarA
KO
K07478
putative ATPase
Organism
lho
Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LOOC260_115680
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_16
AAA_14
Sigma54_activat
AAA_5
TIP49
Mg_chelatase
AAA_19
AAA_22
Sigma54_activ_2
Parvo_NS1
AAA_3
AAA_24
RCF1-5-like_lid
AAA_11
AAA_30
AAA_18
AAA_28
VapE-like_dom
IstB_IS21
DNAX_ATPase_lid
nSTAND3
AAA_25
NB-ARC
ABC_tran
AAA_17
NPHP3_N
AAA_7
DUF815
Motif
Other DBs
NCBI-ProteinID:
BAP86078
UniProt:
A0A0A1GYM1
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Position
1524767..1526062
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AA seq
431 aa
AA seq
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MQQPLAYRMRPTKLEEVVGQQHLVGPGKIINRMVNAKMLSSMILYGPPGTGKTSIASAIA
GSTKYAFRTLNAATDSKKDLQIVAEEAKMSGTVILLLDEIHRLDKTKQDFLLPHLESGRI
ILIGATTENPYISINPAIRSRTQIFQVYPLTEEQMESAVQRALSDKENGLGNMAINLKPE
ALQQLVRATNGDLRSALNGLELAAKSTPANDAGKIELTLPIIEESVQHKALSADKDGDAH
YDVISALQKSIRGSDVDAALHYLARLIESGDLPIIARRLMVIAYEDIGLANPPAASRAVT
AVDAAQKLGFPEARIPLADAVIELCLSPKSNSGITAIDRAIEQVRAGGFGDVPAHLKDAH
YQGAAKLGHGTEYKYPHGFANDWVKQQYLPDRIKNAKYYQPKQNGRFEQALGQQYEQLLE
AQRGSKPQKKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccattggcctatcgaatgaggccaaccaaattagaagaagttgttggccag
cagcatcttgtcgggccaggaaaaataattaatcgcatggtgaacgccaaaatgctgtca
tcaatgattttatatggaccaccaggtactggtaaaactagtattgctagtgccattgcc
ggatccaccaaatatgcatttcgaacgctaaacgcagctaccgattcaaaaaaagacctg
caaattgttgctgaagaagctaaaatgagtggcactgtcattttattactcgatgaaatt
catcgattagataagaccaagcaggatttcttgttgccccacttagaaagtggccggatt
attttaattggtgcgaccaccgagaatccgtatatctcaattaatcctgccatccgcagt
cgaactcaaattttccaagtttatccgctaactgaggaacaaatggaatcagctgtgcaa
cgggcattatcggataaagaaaatggcctggggaacatggcaattaaccttaaaccggag
gcgttgcaacagttggtccgcgcgaccaatggagatttacgtagtgcccttaacggctta
gaactagctgccaaatcaactcctgccaatgacgctggtaaaattgagttaactttgcca
atcattgaggaaagtgttcaacataaggccttgtcggcagacaaggatggtgatgcccat
tatgatgtcatctcggcacttcaaaaatcgattcgtggcagcgatgtggatgcggcgctc
cattatttagcccgtttgattgaatctggtgatttgccaatcatcgctcggcggctaatg
gtcatcgcttatgaagacattggtcttgccaatccacctgccgctagcagagcagtaaca
gctgtggatgccgcgcaaaagctaggctttccagaggctcgtattccgttagcggatgcg
gtaattgagttatgcctgtcccctaaatcaaactcaggtatcacagcgattgaccgtgcg
attgaacaagttcgtgcaggtggttttggcgatgttcctgctcatttaaaggacgcccat
tatcaaggagccgccaagctgggccatggaaccgaatataaatatccccacggtttcgcc
aatgattgggtaaagcaacaatatttacctgacagaatcaaaaatgcaaaatactatcag
ccaaaacaaaatggacgctttgaacaggctttaggacaacagtatgaacaattattagag
gcccaacgaggctcaaaaccgcaaaaaaagaagtaa
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