Paucilactobacillus hokkaidonensis: LOOC260_116140
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Entry
LOOC260_116140 CDS
T03598
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease component
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOOC260_116140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lho02000
]
LOOC260_116140
Transporters [BR:
lho02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LOOC260_116140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_23
Zeta_toxin
AAA_30
AAA_16
ABC_ATPase
RsgA_GTPase
KAP_NTPase
AAA_24
AAA
AAA_5
AAA_14
nSTAND3
AAA_19
DO-GTPase2
AAA_29
AAA_28
AAA_18
AAA_15
MMR_HSR1
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAP86124
UniProt:
A0A0A1GYQ1
LinkDB
All DBs
Position
complement(1568553..1570388)
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AA seq
611 aa
AA seq
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MHNHGRRGSKVADKPHNFWPTTWRLFAYMKSWIPGMVLSLVLAAVSVILSINAPKILGQA
TTEIYAGVTKGYAQMKTGMHVTSLPINFDKIIHILVIVGILYGLSSIFSVVQQVVMTRIS
QQVVYQLRKDFKAKMQRVPVSYYDTHSNGDIMSRAINDMDNIAGTLQQSLIQIVTSVLTF
FGVLYIMLTISWKLTLIALVSVPLSLIVVGLIAPRSQKLFGKQQASLGLLNNHVEENYAG
HTVVRTFNHEQEAIEGFEEQNSNYYKAAWKAQFFSTLIYPLMNFIKNLDYLLVAVVGTIQ
VAGGQITLGNVQALLQYTNQLSQPITQIANLTNTIQATIASAERIFDVLDEPEMLDSKQK
LDNKPAGDVKIEFNDVAFSYDENPLIKDFDLQAPTNHMIAIVGPTGAGKTTIINLLERFY
DVTGGSIYLDGRETRNMSRQTVRQHFAMVLQDTWLFTGTIFDNIKYGKENATDDEVYAAS
REARADSFIRQLPDGYQTILDESASNISQGQRQLLTIARAFVADPEILILDEATSSVDTR
TETLIQTAMNKLQRNRTSFVVAHRLSTIRNAEKIIVMNHGQIVETGDHDGLIAKHGFYAD
LYNSQFMGNQI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcataatcatggaagacgtggttccaaggtagcagacaagccacataatttttggccc
actacatggcggttgtttgcgtacatgaaaagctggattcctgggatggtactgtcactc
gtgctagcggctgtttccgttatcctgtcaattaatgcgcctaagattttaggccaagcg
acaactgaaatttatgctggtgtgaccaaagggtatgcacagatgaaaactggaatgcac
gttaccagtctgcccatcaattttgataaaatcattcatatactggtgattgtcggtatc
ttgtatggtttatcatcaattttcagtgttgtgcagcaggtggtaatgacgcgaatttca
caacaagttgtgtaccaattaagaaaagattttaaagcaaaaatgcaacgagtaccggtt
agctactatgatactcattccaatggtgacattatgagtcgggcaatcaatgatatggat
aatattgctggaacactgcaacaaagtttaattcaaattgttactagtgttctgactttc
tttggagttttgtacatcatgctgacaattagttggaaattaacgttgattgctctagtc
agtgtgccgctaagcttgatcgttgttggtttgattgcaccgagatcacaaaaattattt
ggtaaacaacaggccagtttaggattattaaataatcacgttgaagaaaactatgctggt
catacggttgtacggacgtttaatcacgaacaagaagcaattgagggatttgaagagcag
aattcaaattactacaaggccgcatggaaggcccaatttttctcaaccctgatttatccg
ttaatgaactttattaagaacctagactatttgttagttgcagttgtagggacgatccaa
gtagcgggtggccaaattacattagggaatgtccaggcgctactgcagtacacaaatcaa
ttatcacaaccaatcactcaaattgcgaatttaacgaatacaattcaagcaaccattgca
tctgcagaacggatcttcgatgtcttagatgaaccggaaatgcttgatagcaaacaaaaa
ctggataataagcccgctggtgatgttaaaattgagtttaatgacgtagcatttagttat
gatgaaaatccattaattaaagattttgacttacaggcgcccaccaatcatatgattgcc
attgtgggaccgactggtgctgggaaaacaaccattattaatttgttggaacgcttttat
gatgttacgggtggttcaatatacttggacggacgagaaactcgtaatatgtcccggcaa
acagtccgacaacactttgcgatggtgctgcaagatacgtggctttttaccggtacaatt
ttcgataacattaagtatggtaaagaaaatgcaactgatgacgaggtttatgcagcatcg
cgtgaggcccgagctgatagttttatccggcaattaccagatggatatcaaaccattttg
gatgaatccgcttctaatatttcgcaagggcaacgacaattattaacgattgcacgggcc
tttgttgctgatcctgaaattttaattttggatgaagctaccagttcagttgatactcgc
actgaaacgctgattcaaacagcaatgaataagttgcaacgtaatcgaaccagttttgtg
gtggcacatagattatcaaccatccgaaatgccgaaaaaattattgtgatgaatcatgga
cagattgttgaaaccggagatcatgatgggttaattgctaaacatggtttttatgctgat
ttatacaatagtcagtttatgggtaatcaaatctaa
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