Paucilactobacillus hokkaidonensis: LOOC260_122160
Help
Entry
LOOC260_122160 CDS
T03598
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho00220
Arginine biosynthesis
lho00240
Pyrimidine metabolism
lho00250
Alanine, aspartate and glutamate metabolism
lho01100
Metabolic pathways
lho01110
Biosynthesis of secondary metabolites
lho01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LOOC260_122160 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LOOC260_122160 (carB)
00220 Arginine biosynthesis
LOOC260_122160 (carB)
Enzymes [BR:
lho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LOOC260_122160 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
Dala_Dala_lig_C
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_5
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
BAP86721
UniProt:
A0A0A1H1Z5
LinkDB
All DBs
Position
complement(2207047..2210226)
Genome browser
AA seq
1059 aa
AA seq
DB search
MPKRQDIHKILVIGSGPIIISQAAEFDYSGTQACLALKEEGYEVVLVNSNPATIMTDPEI
ADQVYIEPLTLEFVSRVIRKERPGAILPTVGGQTGLNLAKQLDEAGILAVFKIELLGTSL
HSINQAEDREQFKELMQQLGEPVPESKTVTTVEEAQTFASKIGFPVIIRPAYTLGGTGGG
IADNAAQLDEIATTGLALSPITQVLIEQSIAGYKEIEFEVMRDHNDNTMVVCSMENFDPV
GIHTGDSIVYAPVQTLSDREYQMLRDVSLKLISALKIEGGCNVQLALNPQNYEYEVIEVN
PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEIKNPITQTTFAAFEPTLDYVVCKIPRW
PFDKFNHADRLLGTQMKATGEVMAIGSNIEEATQKAVRSLEIGTQSLELPELNRVSDQIL
ADRLVNARDDRLFCVIEALKRQWPVMEVHELTKIDLFFLDKLVHILEITTALKQAPQDLK
LLQLAKQNGFADATIGQIWNITTDEIRRQRKENGIEPVYKMVDTCAAEFESQTPYFYSTY
EVENESIRDSKPAVLVIGAGPIRIGQGIEFDYATVHCVQTLKEAGYEAIIMNNNPETVST
DFSISDKLYFEPLTLEDVLNVIDLEQPIGVIVQFGGQTAINLAEPLEKHGVKILGTAVKD
VNRAEDRDEFNQIIQELQIPQPTGATATTNEAAMKIGAKIGYPLLVRPSYVLGGRAMEIV
HNDEQLNHYMHAAIEVSHAHPVLLDRYLTGKECEVDAICDGDTVVIPGVMEHIERAGIHS
GDSMAVYPPQTLSTKVIDQIEQATIKLAHALNCYGLMNVQFVIHEEQAYVIEVNPRASRT
VPFLSKTSKIPMTQLATQVIMGQKLAKLGYQTGIQPNSKLINVKAPIFSFSKLNAVDSLL
GPEMKSTGEVMGSDVTFEKALYKVFQASDIDLPAHGNILMTVRDEEKPQAAKLARQLSQL
NFNLYATKGTAQYLQQQGILVHQQVAKLSEDENQITTLLSDKTISLVVNTIDDNTKAVSD
GVKMRALAISHGVLVLTSLDTLAAVVRMLASQAYLVNAI
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgacaggatatccataaaatactggtcattggttctggtcccattattatt
agtcaggcggctgagtttgattattctgggacacaagcttgtcttgctttgaaagaagaa
ggctacgaagttgtgcttgtgaattcaaatccggcaacgattatgacagatccagagatt
gcggatcaggtctatattgaaccgctaacgcttgaatttgtgagtcgagtcattcgcaag
gaacgtccaggtgcgattttgccaacggtgggtggtcaaactggtttgaatttagcgaag
caattggacgaagctggcattttagcagtcttcaaaattgaactgctaggaaccagttta
cactcgatcaatcaggctgaagaccgcgaacaatttaaagagctgatgcaacaattaggc
gaaccagtgcccgaatcaaaaacggtaacgactgttgaagaagcgcaaacgtttgctagc
aagattggatttccagtcatcattcgaccggcctacacattgggcggaaccggtggtgga
attgccgataatgccgcgcaattagatgaaattgctacgacggggttagcattatccccc
attacgcaggtgttgattgaacaaagtattgctggttataaagaaatcgagtttgaagtc
atgcgtgatcacaatgacaatacgatggttgtttgttcaatggaaaattttgatccagtg
ggtattcatacgggagattcaattgtatatgcaccggtgcaaactttgtcagatcgcgag
tatcaaatgctgcgggatgtatcacttaaattgatttcggcacttaaaattgagggtggc
tgtaacgtccaattggcacttaacccgcaaaactatgagtatgaagtgattgaggtaaat
ccgcgtgttagtcgatcctctgcgttagcgtcaaaagcaaccggatatccgattgccaaa
ttggccgcaaaaattgcagttgggttgacgcttgatgaaatcaagaatccaattacacaa
actacttttgcggcgtttgaaccgaccctagattatgtagtttgtaaaattccgcggtgg
ccatttgataaatttaaccatgcagatcgattgctggggacccaaatgaaagcgaccggt
gaagtaatggcgatcggcagcaatattgaagaagctactcaaaaagcggttcgatcatta
gagattggcacgcaatccctggaattacctgaattgaatcgggtaagtgatcagatatta
gctgatcggctggttaatgctcgtgatgatcgcctcttttgtgtgatagaagcacttaag
cggcaatggccggttatggaagtacatgaattaacaaagattgatttatttttcctagat
aaattggttcacattttagaaattacaacagctttaaaacaagcaccacaagacctgaaa
ttgctacaattagcaaaacaaaatggatttgcggatgcaacgattggacaaatttggaat
attacgacagatgaaattcgcagacaacgaaaagaaaatggcatcgaaccggtctacaaa
atggtggatacttgtgcggcggaatttgagtcacaaaccccatacttctatagtacttat
gaagtcgaaaatgaaagcatacgagatagtaaaccagctgttttggttatcggagcaggc
ccaattcggattggacaaggaattgaattcgattatgccaccgtgcactgtgttcaaaca
ctcaaagaggctgggtacgaagcaattattatgaacaataatcccgaaacagtctcgact
gatttttctatctcagataaattatattttgagccactaacgttggaagatgtgctcaac
gtaattgatttagagcagccgataggcgtaatcgtccagtttggtggtcaaaccgcaatt
aacttagccgaaccattagaaaaacatggtgtcaaaatattggggacggctgtcaaagat
gttaatcgcgctgaagatcgggatgagtttaatcaaatcattcaagagctacaaattcca
caaccgactggtgcaaccgcgacaactaatgaagcggcgatgaagatcggcgccaaaatt
gggtatccattattagttcgaccaagctatgttttaggcggtcgggcaatggaaattgtg
cataatgatgaacagctaaatcattatatgcacgctgcaattgaagtgtctcacgcccat
ccagttttattagatcgttatttaacgggtaaagaatgtgaagttgatgcgatttgtgat
ggtgacacggttgttattcctggtgtgatggaacatatcgaacgagccgggattcactct
ggcgactcgatggctgtgtatccgccacaaactttatcaacaaaagttattgatcaaatt
gagcaggcaaccattaaattggcgcatgcgttaaattgttacggattgatgaacgttcaa
tttgtcattcatgaagagcaagcatatgtgattgaagtcaatccacgtgctagtcggacg
gttccatttttaagcaagacaagtaaaatcccaatgacgcagttggcgacgcaggtaatt
atgggccaaaagttagctaaattaggctatcaaacggggattcaacctaattcaaaatta
attaatgtcaaagcgcccatcttttcctttagtaaattgaatgcagttgatagtttgcta
gggcctgaaatgaaatcgactggcgaggtaatgggcagtgatgttacgtttgaaaaggcg
ctttacaaggtattccaagctagcgatattgatttaccagcacatgggaatattttgatg
actgtcagggatgaagaaaaaccgcaagctgcgaaattagcacgacagttaagtcaatta
aattttaatttgtatgcaacaaaaggaacagcacaatatttgcaacaacaaggtatctta
gtccatcaacaagttgctaaattaagcgaagatgaaaatcaaattacaacgttattatcc
gataagaccatctctttggtagtaaatacaattgatgataataccaaggcggtcagcgat
ggggttaagatgcgtgcattggcaattagtcatggtgtcttagtgctaacttcattggat
acccttgctgcagtagtacgaatgttagcaagccaagcttatctagtaaatgcaatttga
DBGET
integrated database retrieval system
