Paucilactobacillus hokkaidonensis: LOOC260_122640
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Entry
LOOC260_122640 CDS
T03598
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
lho
Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lho03016
]
LOOC260_122640 (gidA)
03036 Chromosome and associated proteins [BR:
lho03036
]
LOOC260_122640 (gidA)
Transfer RNA biogenesis [BR:
lho03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LOOC260_122640 (gidA)
Prokaryotic type
LOOC260_122640 (gidA)
Chromosome and associated proteins [BR:
lho03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LOOC260_122640 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_binding_2
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
HI0933_like
DAO
Pyr_redox
ThiF
Thi4
Motif
Other DBs
NCBI-ProteinID:
BAP86769
UniProt:
A0A0A1H0H8
LinkDB
All DBs
Position
complement(2271962..2273890)
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AA seq
642 aa
AA seq
DB search
MEQALPYKGNDYDVIVVGAGHAGSEAALAAARMGNKTLLVTISLDMVAFMPCNPSVGGPA
KGIVVREIDALGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKHAYHTEMKRTMERE
PNLTLRQATVDSLIVEDGVCKGVVTNTGAHYSAKSVVLTVGTSARGKIIIGELQYSSGPN
NSKPAMKLSENLAELGFELERFKTGTPPRVDGTTINYDETEEQPGDEEPNHFSFETPDSN
YLLLKDQLSCWLTYTNETTHTIIRNNLDRAPMFSGAVEGVGPRYCPSIEDKVVRFADKPR
HQLFLEPEGRRTEEWYLQGLSTSLPEEIQQQIIHSIKGLENAEMMRPGYAIEYDVVAPYQ
LRPTLETKLIKNLYTAGQTNGTSGYEEAAGQGIIAGINAGLRALDRGQFTLKRSDAYIGV
MIDDLVTKGTKEPYRLLTSRAEYRLILRHDNADLRLTEKGHDIGLISDERLARFEAKKEA
ITQEKERLATVRIKPTADVNAFVEARGEKPLQDGILANEFLRRPQVTYADLLKFIPAPEV
PLDHRIIEQIEVQVKYEGYIKKAEQKVERLKKMEAKKIPDQIDYDAIDGLATEAHQKLKK
IQPETIAQASRISGVNPADIAILSVYIQQGKIAKVGSVQKGA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagctttaccttataagggaaatgattatgatgtcatcgttgtcggtgctggg
catgctggtagtgaagcagcactggcagctgcacgaatgggcaacaaaacgttactagta
acaatcagcttggatatggtggcttttatgccttgtaatccatcagttggtggaccagct
aaaggaattgttgttcgtgaaattgatgctttaggtggagaaatgggacgcaacattgat
aaaacatatgtccaaatgagaatgttaaatacgggtaagggtcctgcagtgcgtgcatta
cgagcgcaggctgataaacacgcctatcatacagaaatgaagcgaacaatggaacgtgag
cctaatttaacattacgccaagcaacggtggattcattaatcgttgaagatggtgtctgt
aaaggagttgtcaccaacactggggcccattattcggccaagagcgttgtcttaactgtg
ggaacctctgctcgaggtaagattatcattggtgagctacagtattcttcagggcctaat
aactctaagccggcaatgaagttgtctgaaaatttagcagaattaggatttgagctggaa
cggtttaaaactggaacgccgccacgagttgatggaacaacgattaactatgatgagact
gaggaacagccaggtgatgaagagccaaaccattttagttttgaaacgcctgacagtaat
tatttactcttaaaggaccagttatcatgctggttaacttatacaaacgaaacaacgcat
acgattatccgcaataacttagatcgtgctccaatgttttccggcgcggttgaaggggtg
ggaccgcggtactgtccttcaattgaagataaagtcgttcgatttgctgacaaaccgcga
catcaattgttcttagagccagaaggtcgccggactgaggaatggtatctacagggatta
tcgacatcattgccagaagaaatccaacaacagattattcattcaattaagggactagaa
aacgctgagatgatgcggccaggttacgcgattgaatatgatgtggtggcaccttaccaa
ttacgaccaacattagaaacaaaattgatcaaaaacctatacacagcagggcaaactaac
ggcacatcgggttatgaagaggctgctggacagggaattatcgccggaattaatgctgga
ttacgtgccttagatcgtggtcaatttacattgaaacgatcagatgcttatattggtgtc
atgattgatgatttagttactaaaggaactaaagaaccataccgcttgttaactagcagg
gctgagtaccgtttgattctacgtcatgataatgcagatttacgattaacggaaaaaggc
cacgatattggtttaattagcgacgaacgattagcaagatttgaagctaaaaaagaagca
attactcaagaaaaagagcgtttggcaacggttcgaattaagcccactgctgatgtgaat
gcctttgttgaagcccgaggagaaaagccactgcaggatggaattttagcaaacgaattt
ttacggcggccacaagtcacctatgcagatttgttgaagtttattccagcaccagaagtt
cctttggatcaccgaattattgaacaaatcgaagttcaggtgaagtatgaaggttacatc
aaaaaagccgagcaaaaagtggaacgattgaagaaaatggaagccaaaaaaattcctgat
caaattgattatgatgcaattgatggtttggccactgaggcccatcagaagctcaagaag
attcaaccagagacaattgctcaagcatcccgaataagtggcgttaacccagctgatatt
gcgatattgagtgtttatattcaacaggggaagattgccaaggtaggaagtgtgcagaaa
ggtgcatag
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integrated database retrieval system
