Paucilactobacillus hokkaidonensis: LOOC260_200010
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Entry
LOOC260_200010 CDS
T03598
Symbol
repA
Name
(GenBank) plasmid replication protein
Organism
lho
Paucilactobacillus hokkaidonensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriCT_1
MarR_2
SseB
HTH_Crp_2
GntR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BAP86775
UniProt:
A0A0A1GXH1
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All DBs
Position
pLOOC260-1:1..1314
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AA seq
437 aa
AA seq
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MYDFKTIQDAQRLVLHDSLHTYKVKNSSSNIAGQVMETPTKKGAIALFSSKDSMQKAHGV
VVTSFEALDAIADRMTHWTPNTFNWLGYTQNRGSVRGHREANLAQINTLVVDIDFSDAQE
RDAREREVLGAVTVADLFIPTMILRTAKGFHIYYVFDQPMFLRKKRGQFPVLKAAQKMSN
FVRQWIQQRVAGVDVGCNNFGIFRIPRQDNLIFFDANMLIQVSALMKWSQYYAAQVPVTD
QTGDKVISLSPDEGRQVDQAWFKALLKVTTVKSGHGLARHNTVMTLALAMYQSKVSQQRA
RDVLDVFNSNLHEPLVDREVVQCVRDAYSGDYRGAALSYVQGLLDQWVPNFSGKVVAGIG
WHKFAKPRAERQYSHAHEWRQDVLALINRMGGSAASVAMSTRQIQAELGISPASLNRVMK
QLQATSQLRRVQRGNGF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtatgattttaagacaattcaagacgcgcaaagactggtattacacgattcattacat
acatataaagttaaaaatagtagttctaatattgccggacaagtgatggaaacccctaca
aagaagggggccattgcgctcttcagcagtaaggattcgatgcaaaaagcccatggtgtt
gtggtcacctcttttgaagcactggacgccattgctgatcggatgactcactggacgccc
aatacattcaactggctgggctacacgcagaacagggggagcgttcgtggtcaccgagaa
gctaacttagctcagattaataccttggtcgttgatattgatttttctgacgcgcaagaa
cgcgatgctcgggagcgggaagttttgggtgcggtcacggttgccgacttattcattccc
acgatgattttgcggactgcgaaggggttccatatctactacgtttttgatcaacccatg
tttttgcggaagaaacgcggccagtttccagtcttaaaagcagcccagaaaatgtctaat
tttgtgcggcaatggattcagcagcgagtggctggagtcgatgtaggttgtaataatttt
gggatttttcgaataccacgtcaggataatctgattttttttgatgctaatatgttgatc
caagtgagcgctttgatgaagtggtcacagtattatgctgctcaagttcccgtcacggac
caaacgggagataaggtgatttcattgtctcctgatgagggtcgtcaggttgaccaggcc
tggtttaaagcgttattgaaagtgacaacagttaagtcagggcatggtttagcccgtcat
aacaccgttatgacactagctttagcgatgtaccaatctaaagtttctcagcagcgtgcg
agagacgtccttgacgtgtttaattcaaatttacatgagccattggtcgaccgtgaagtt
gtacagtgcgtcagagacgcttattcaggtgactatcgaggggccgcactgagttatgtt
caaggactattggatcaatgggtgcctaatttttcaggtaaagtcgttgcggggattggc
tggcataaatttgctaagccacgtgccgaacggcaatacagtcatgcccatgaatggcgt
caagacgtgcttgcgttgattaatcgaatgggtggttctgctgcttcggttgccatgtca
acgcgtcaaattcaggctgagttagggatttctccggcgagtttgaatcgggttatgaag
caattacaagcaacttcgcaattgaggcgggtgcagcgtggtaacgggttctga
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