Longimonas haloalkaliphila: JCM31343_30360
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Entry
JCM31343_30360 CDS
T12012
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
lhp Longimonas haloalkaliphila
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
FleQ
AAA_5
AAA
Mg_chelatase
HTH_50
AAA_16
ABATE
HTH_23
AAA_19
AAA_2
AAA_7
ATPase
TP_0454_N
HAD
Motif
Other DBs
NCBI-ProteinID:
BHC56977
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Position
pJCM31343:complement(52051..53484)
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AA seq
477 aa
AA seq
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MAQSTQRTHLDETQPVGNQSGDDHTRCGTILVVDDDPHIREGLSDILDHAGHDIIEASDG
KTALHLIKERDINLMLLDLQLPRVGGMSVLKQVAHTHPGLPVVIVSGKGTIQTAVEATKL
GAYDFLEKPVDAQRTLITVRNALEKSQLEHDRSRLLREVRARYQMVGSSEPMQRVYDLID
KAAATSSKVLVTGENGTGKELVARAIHHNSARASEPFVTVNCAAIPESLIESELFGHEKG
AFTGAKKRRKGKFEQADGGTLFLDEVGDMGTMTQAKALRALQEGTIQRVGGEKPISVDAR
VIAATNKNLKEEIDDGTFREDLYYRLNIIAIEVPPLRARREDIPKLIDHFLEQFSEANSV
ASRTIDSGALAKLMGREWPGNVRQLRNVVERLVALSDSATIQVAEVGRALQETPPTAEST
AENNDLRSAREEFERSFIHRTLVAHDGGIQDTADALGISRSHLWKKMKRYQIEAPGE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcaacacaacgcacgcatttagacgaaactcaaccggtgggaaaccaatca
ggagacgatcacacgcggtgcggtaccattctggtcgtcgatgacgacccgcacattcgc
gaagggctctccgacattcttgatcatgccggacacgacatcatcgaagcaagcgatgga
aaaacggccttgcatctcatcaaggaacgcgacatcaacctgatgcttctcgacctacag
ctgccgcgcgttggcgggatgagcgtgctgaagcaggtggcccacacccatcctggcctg
cccgtagtgatcgtcagcggaaaaggcacgattcaaactgccgtggaagccaccaagctc
ggcgcctacgacttcctcgaaaagccggtcgatgcacagcgcaccctcatcaccgtgcgc
aatgcgctggagaagtcgcagttggagcacgaccgcagccggcttttgcgcgaggtgcga
gcgcgataccagatggtcgggtcgagcgagccgatgcagcgcgtatacgacctgatcgac
aaggccgccgccacgtcgagcaaggtgctcgtaaccggcgaaaacggcaccggaaaggag
cttgtcgcccgtgcgattcaccacaacagcgcgcgcgccagcgaaccgttcgtgaccgtc
aactgcgccgcgatccccgagtcactgatcgagagcgagcttttcgggcacgagaaaggc
gcgttcaccggcgccaagaaacggcgcaagggcaagttcgagcaggccgacggcggcacg
ctgtttttggacgaggtcggcgacatgggcaccatgacgcaggcgaaggcgctccgtgcg
ctgcaagagggcacgatccagcgcgtggggggcgaaaaacccatttcggtcgatgcgcgc
gtcatcgcggccaccaacaagaacctgaaggaagagattgatgatgggacgtttcgggag
gacctctactaccggctgaacatcatcgccattgaggtgccgccactgcgcgcccggcgc
gaagacatccccaagctcatcgaccacttcctggagcagttcagcgaagccaacagcgtg
gcctcccgcaccatcgactcgggggccctggccaagctcatgggacgcgaatggcccggc
aatgtgcggcaactgcgcaacgtggtcgaacgcctcgtggccctaagcgacagcgcgacc
atccaggtggccgaagtaggccgcgccttgcaggagaccccgcccaccgcagagtcaaca
gccgagaataacgacctgcgatcagcccgcgaagagtttgagcgcagctttatccaccgc
accctggtcgctcatgacggcggaatccaggataccgccgatgccctcgggatcagccgc
agccacctctggaagaagatgaagcgctaccagatcgaggctcccggtgaatag
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