Lactobacillus helveticus R0052: R0052_00025
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Entry
R0052_00025 CDS
T02217
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lhr
Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhr03032
]
R0052_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
lhr03400
]
R0052_00025 (gyrB)
Enzymes [BR:
lhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
R0052_00025 (gyrB)
DNA replication proteins [BR:
lhr03032
]
Prokaryotic type
DNA Topoisomerases
R0052_00025 (gyrB)
DNA repair and recombination proteins [BR:
lhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R0052_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFR21053
LinkDB
All DBs
Position
4272..6236
Genome browser
AA seq
654 aa
AA seq
DB search
MADNSKKNLDKVKKYEKEADKYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEII
DNSIDERLAGFATKIEITVNEDGSVTVQDDGRGIPVDIQKKTGRPALETVFTVLHAGGKF
GGGGYKVSGGLHGVGASVVNALSTKLDVTVMRDGKKYFIDFDHGRVKDEMKQIGTVPLDQ
HGTIVHFYPDPDIFTETTTFDDKILKNRIRELAFLNKGLKLTFTDKRKDSAETDVYKYEG
GIKEYVAFLNKGQEVLFDEPIYVESTYNGIDVEVALQYTNGYKTTLMTFANNIHTYEGGM
HEAGFKTALTRVVNDYAHKAKILKDKDDNLSGEDIREGMTVVVSVKHPSPQFEGQTKTKL
GNSDARTAVDKSFSETFSRFLMENPSVGRKIVEKGQLAERARTAAKRAREVTRKKSGLEI
ANLPGKLADNTSNDPSISELFIVEGNSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDR
ILANQEIRSLFTALGTGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYNYMRPM
IEKGYVYIARPPLYQVRQGKVIKYLDTDEELHDYLGSLQPSPKPVVQRYKGLGEMDPEQL
WETTMNPENRRLDRVSPEYAKDADAVFELLMGNEVAPRRDFIQKNAKYVENLDA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctgataattcaaagaaaaatcttgataaggtcaaaaaatatgaaaaagaggccgac
aagtataatgccagtcaaattcaagtcttaggcggcctggaggctgttcgtaagcgacca
ggtatgtatatcggttcgactagttctcagggattgcaccacttagtgtgggaaattatt
gataacagtattgatgaacgacttgctggttttgctaccaagattgaaattactgttaat
gaggatggtagtgttactgttcaagatgatggtcgtggtatcccagtagatattcaaaaa
aagacaggtcgtccagctttagagactgtatttactgtacttcacgccggtggtaaattc
ggcggtggcggatataaggtatcaggtggtcttcacggtgttggtgcatctgttgtaaat
gctttgtccaccaagcttgatgtaactgtcatgcgtgacggtaaaaagtatttcatcgat
tttgatcacggccgcgttaaggatgaaatgaagcagattggtactgtgccacttgatcaa
catgggactattgttcatttctatccagatcctgacatttttactgaaactactactttc
gatgacaagatcttaaagaatagaattcgtgaacttgcatttttaaacaagggattgaaa
cttacttttacagataagcgtaaagatagtgccgaaaccgatgtatacaagtacgaaggt
ggtattaaagaatacgttgcctttttgaacaaggggcaggaagtattatttgatgaacct
atctatgtcgaaagcacatataacggcattgacgtggaagttgctttgcaatatacaaat
ggctacaaaactactttaatgacctttgccaacaatatccatacctatgaaggggggatg
cacgaagccggcttcaagactgctttgactcgtgttgtaaatgattatgctcataaggca
aaaatcttaaaagacaaggatgataacctttctggtgaagacatccgtgaagggatgacg
gttgttgtttcagttaagcaccccagccctcaatttgaagggcagactaagacaaaattg
ggtaactcagatgctagaacagcagtagataagtcattctctgaaacctttagtcgcttc
ttaatggaaaacccatcagttggacgcaaaattgtggaaaagggtcaacttgccgaacgt
gctagaaccgctgctaagcgtgcacgtgaagttactcgtaaaaagtctggtttggaaatt
gcaaacttgccaggtaaattagccgataatacaagcaatgatccaagtatttctgaatta
ttcatcgttgagggtaactcagccggtggttcagctaagcaaggtagatctcgtttaacc
caagccattttgccaatcagaggtaagattttaaacgttgaaaaagcttcaatggatcga
attttggccaaccaagaaattagatctttgtttacagctttaggtacaggatttggtgcg
gactttgatgtgtctaaagcacgttatcataagttgattattatgactgatgccgatgtc
gatggtgctcacattagaactttgcttttgacgctgttttacaattacatgcgtccaatg
attgaaaaaggatatgtatacatcgctcgtccacctctgtaccaagtccgtcagggcaag
gtaattaagtatcttgatactgatgaggaattgcatgattacttaggtagtttgcagcca
agtcctaagcctgttgtacagcgttacaaggggttaggtgaaatggacccagagcagtta
tgggaaactactatgaatccagaaaatagacgtttggatcgagtaagtcctgaatatgcc
aaggatgcagatgcagtctttgaactcttaatgggtaatgaagttgctccaagacgtgac
tttattcaaaagaatgctaaatatgttgaaaatttggatgcatag
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