Lactobacillus helveticus R0052: R0052_01195
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Entry
R0052_01195 CDS
T02217
Name
(GenBank) DCMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lhr
Lactobacillus helveticus R0052
Pathway
lhr00240
Pyrimidine metabolism
lhr01100
Metabolic pathways
lhr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
R0052_01195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lhr02044
]
R0052_01195
Enzymes [BR:
lhr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
R0052_01195
Secretion system [BR:
lhr02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
R0052_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
XOO_2897-deam
DUF7184
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-ProteinID:
AFR21261
LinkDB
All DBs
Position
215666..216145
Genome browser
AA seq
159 aa
AA seq
DB search
MHDRIPWKQYFMMQALVIAQRSTCNRALVGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQ
MVDGHCVRTIHSEMNAIIQCAKFGVSTDDTEIYVTHFPCYNCCKSLLQAGVKKINYYFDY
RDNPLAMQLLHDCGVPYEQIKIDRKYVESLAYKLEEDEN
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatcgaattccttggaaacaatatttcatgatgcaagcactagtaatagcacag
cgttctacttgtaatagagctcttgttggtagtgttttagtaaaagataatcgtattatt
ggcacagggtataatgggtccgtttctggacagccacattgtgatgaagtaggccatcaa
atggttgatggacattgcgttcggactattcattccgagatgaatgccatcattcaatgt
gcaaaatttggcgtatcaactgatgatactgaaatatatgtgactcattttccttgttat
aattgctgcaaatctttacttcaagctggcgtaaagaaaattaattattactttgattat
cgcgacaatccgttggcaatgcagctgcttcatgattgtggggtaccatatgaacagatt
aaaatcgatcggaaatatgtggaaagcttggcttataaacttgaagaagatgaaaactag
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