Lactobacillus helveticus R0052: R0052_01415
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Entry
R0052_01415 CDS
T02217
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lhr
Lactobacillus helveticus R0052
Pathway
lhr00260
Glycine, serine and threonine metabolism
lhr00460
Cyanoamino acid metabolism
lhr00630
Glyoxylate and dicarboxylate metabolism
lhr00670
One carbon pool by folate
lhr00680
Methane metabolism
lhr01100
Metabolic pathways
lhr01110
Biosynthesis of secondary metabolites
lhr01120
Microbial metabolism in diverse environments
lhr01200
Carbon metabolism
lhr01230
Biosynthesis of amino acids
lhr01240
Biosynthesis of cofactors
lhr04981
Folate transport and metabolism
Module
lhr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R0052_01415 (glyA)
09102 Energy metabolism
00680 Methane metabolism
R0052_01415 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R0052_01415 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
R0052_01415 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
R0052_01415 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
R0052_01415 (glyA)
Enzymes [BR:
lhr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
R0052_01415 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AFR21297
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All DBs
Position
255320..256555
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AA seq
411 aa
AA seq
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MKYAEKSPALWDAIHKEEQRQQNTIELIASENIVSDAVREAQGSVLTNKYAEGYPGRRYY
GGCQYIDQVEQLAIDYAKKLFNAKFANVQPHSGSQANMAVYQALLKPGDKILGMGMGAGG
HLTHGSKVNFSGKYYQSYSYGLNVETEELDFDEIRKIALKVKPQLIVAGASAYSRIIDWQ
KFRKIADEVGAYLMVDMAHIAGLVATGQHPSPIPIADVVTTTTHKTLRGPRGGMILSNNL
ELGKKINSALFPGTQGGPLEHVIAGKAQAFYEDLQLQFTDYIKQVIKNAKTMAETFAQSD
NIRVVSGGTDNHLMIIDITDTGLTGKDAQNLLDYVHITTNKESIPGDKRSPFVTSGLRIG
TPAITSRGFDEEDAKKTAELIIEILSNPEDEATIDHVKQEVKGLTQKHPID
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatatgcagaaaaatctcctgctttatgggatgcaattcataaagaagaacaacgc
caacaaaatactatcgaattaatcgcgtcagaaaatattgtttctgatgccgttcgtgaa
gcccaaggctcagttttaactaataaatatgcagaaggctatccaggtcggcgttactat
ggtggctgtcaatacatcgatcaagttgaacaactagctattgattatgctaaaaagctt
tttaatgcaaaatttgccaatgtacagccacactctggttctcaagccaatatggctgtt
taccaagcacttttaaaacctggcgataagatcctgggtatgggcatgggtgccggtgga
caccttacacatggttctaaagtaaacttcagtggtaaatattatcaatcttatagttat
ggtttaaatgtagaaacagaagaactggattttgatgaaattcgtaaaatcgctttaaag
gtaaaaccacaattaattgtagccggtgcttcagcttacagccgtattattgattggcaa
aaattccgtaaaattgcagatgaagttggtgcttacctgatggtagatatggcacacatc
gctggtttggtcgcgacaggtcagcatccaagtccaattcctattgcagatgttgtgact
acaactacacacaaaaccttacgtggcccacgtgggggcatgattttatctaataatctt
gaacttggcaaaaagattaattcggcattattccctggtacgcaaggcggaccgcttgaa
catgtaattgcgggcaaggcgcaagcattctatgaagatttgcagctacaatttacagat
tatattaagcaagtaattaaaaatgctaagacaatggctgaaacttttgctcaatcagat
aatattcgagtagtttcaggtgggactgataaccatttaatgatcattgatattaccgat
accggattaactggtaaagatgctcaaaacttgcttgattatgttcacatcacaacaaat
aaggaatcaattccaggtgataagcgcagtccatttgtaactagtggcttgagaataggt
acgcctgctattactagccgcggatttgatgaagaagatgctaaaaagactgctgaatta
attattgaaattttatctaatccagaagatgaagcgacaattgatcatgttaagcaagaa
gttaagggattaactcaaaagcatccaattgactaa
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