Lactobacillus helveticus R0052: R0052_02460
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Entry
R0052_02460 CDS
T02217
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
lhr
Lactobacillus helveticus R0052
Pathway
lhr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
R0052_02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhr03400
]
R0052_02460
DNA repair and recombination proteins [BR:
lhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
R0052_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
AAA_29
DAP3
AAA_14
nSTAND_NTPase5
G-alpha
Motif
Other DBs
NCBI-ProteinID:
AFR21466
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Position
421523..424120
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AA seq
865 aa
AA seq
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MAEKTTPMMEQYYEIKKQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKTKNP
IPMAGVPHMAVDTYVNTLVEKGYKVALCEQLEDPKKAKGMVKRGIIQLVTPGTMMNEGPN
DAKDSNYLTSVVTTKSGFGLAYSDLSTGEIYSTHLKSFAAVSNELLSLRTREVVYNGPLT
EQNKDFMHKANITVSAPTPIEGEHAEISYVEQNLTNGAEKSATRQLVGYLLSTQKRSLAH
LQIAKSYEVNQYLQMSHTVQNNLELVASAKTGKKMGSLFWVLDKTHTAMGGRLLKQWLAR
PLLNVDIINHREEMVQALLDGYFTRENTIDALKGVYDLERLTGRIAFGNVNARELLQLSR
SLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELISTTLVKDPPLLTTEGGLIRDGVD
KQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNKVFGYYIQVSNGNKSKVPLDRY
TRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQL
AALDVYCGFATVAEQNNYCRPSFHTDSQDIDVVNGRHPVVEKVMTAGSYIPNDVKMDSAT
NIFLITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQ
STFMVEMSEANDALQYATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFAT
HYHELTSLDETLDYLKNIHVGATEENGKLVFLHKILPGPADQSYGIHVAQLAGLPCAVLR
EATKLLKRLEAQGSELAPVRQQLDLFAQPEAASDEVDDNDSENSPMTDAEQDVLDDISNL
YLADKTPLQIMQMVANWQKDLKDDK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaaacaactcctatgatggagcagtattatgaaatcaagaaacaatatcct
gacgcctttcttttttatcgcgtcggagatttttatgaattatttgaagatgatgcggtt
aaaggggcacagattctggaattaactctgactcatcgatcaaataagaccaagaaccct
attccaatggcaggcgttccacacatggctgtggatacttatgtgaatactttggttgaa
aaagggtataaagtcgctctttgtgaacaacttgaagatcctaaaaaagctaaaggcatg
gtaaagcgaggcatcattcagttagtaactccaggtaccatgatgaatgaaggacctaat
gatgctaaggattctaattatttaacttctgtggttactactaaaagtggttttggttta
gcttacagtgatttatccaccggtgaaatttattctactcatttaaagagtttcgccgca
gtttctaatgaacttttgtctttaagaacaagagaagttgtgtataacggtccattaact
gagcaaaacaaagactttatgcacaaggctaatattacggtttctgcacctacaccaatt
gaaggcgaacatgcggaaatttcttacgttgaacaaaacttgactaatggagcagaaaag
tctgcaacgcgtcaattagttggctacttgctttcaacccaaaagagaagtttagcccac
ttacaaattgctaagagctatgaagtaaatcaatatttgcagatgtcacacactgtacaa
aataatttggaattagtggcatcagctaagaccggtaaaaagatgggctcacttttctgg
gtattggataaaactcatacagccatgggaggtcgtcttcttaagcagtggttggcccgt
ccattgttaaacgtggatatcattaatcatcgtgaggaaatggtccaagcattgcttgat
ggctatttcactcgtgaaaacactattgatgccttaaagggcgtttatgacctagaacgc
ttaacaggacggattgcctttggaaatgtaaatgcccgtgaattattgcaattatcacgt
tctttgcaagcagtcccagttattcttgatgctctcaatcaatctgacagtgatgttttg
acagattttgccaaaaaaatcgatcctttaaagggtgttgctgaattaatttctacaact
ttagtaaaagatccaccgcttttaactacagaaggtggattaatcagagatggtgtggat
aaacagcttgatcgctatcgggatgccatgaataatggtaaaaaatggctggttcaaatg
gaaactgatgaacgtcaaaagacaggaattgaaaacttaaaagtaggtttcaataaggtc
tttggttattatattcaggtttctaatggtaataagagcaaggtgcctcttgatcgctat
actcgtaagcaaaccttaactaatgccgaacgctacattaccccagagttaaaagaacac
gaaaatctaatattagaggctcaaactcgctcaactgatctggaatatgatttatttgtt
caattgcgtgatgaagttaagaagtacattcctgctttgcaaaaattaggcaatcaatta
gctgccttggacgtttattgtggcttcgctacagttgctgaacaaaataattattgtcgt
ccatctttccatactgatagtcaagacattgatgtcgttaatggccgtcacccggttgtg
gaaaaagtaatgactgcaggttcatacattcctaatgatgtgaagatggattctgctaca
aatatctttttgattactggaccaaacatgtcaggtaagagtacttatatgcggcagatg
gcattaattgcaattatggcccaagttggttcttttgttcccgctgatagtgctgctttg
cctatttttgatcaaatttttacccgtattggtgcagccgatgatttgatttctggtcaa
agtactttcatggtggaaatgagtgaagcaaatgatgctttgcaatatgctactaaacgc
agtcttgtattattcgatgaaattggacgtggtacagctacttatgacggtatggcttta
gcaggtgcaattgttaaatatctgcatgataaagtaggagctaaagcactttttgccact
cactatcatgaattaacaagtcttgatgaaacgctggattatttgaaaaatatccatgtt
ggtgcaactgaagaaaacggtaagttagttttcttacataagattttgccaggtcctgct
gatcaaagttatggtatccatgttgcacagcttgctggcttgccatgtgccgttttacgt
gaagcaactaagttgctaaagcgtctagaagcacaaggcagtgaattggctccagttagg
caacagctagatttatttgcccaaccggaagctgcttctgatgaagtggatgataacgat
agtgaaaacagtccaatgaccgatgcggaacaagatgtgctggatgatatttctaatctt
tatttagctgataagacaccactgcagattatgcaaatggtggctaattggcaaaaagac
ttgaaggatgataaataa
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