Lactobacillus helveticus R0052: R0052_02500
Help
Entry
R0052_02500 CDS
T02217
Name
(GenBank) ATP-dependent helicase (DEAD/DEAH box family) protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lhr
Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhr03019
]
R0052_02500
03009 Ribosome biogenesis [BR:
lhr03009
]
R0052_02500
Enzymes [BR:
lhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R0052_02500
Messenger RNA biogenesis [BR:
lhr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R0052_02500
Ribosome biogenesis [BR:
lhr03009
]
Prokaryotic type
rRNA helicases
R0052_02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFR21474
LinkDB
All DBs
Position
431852..433213
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFADSRIKPAIQEGLKKIHFEKPTKVQEKVIPAMLSDLSVVVQAATGSGKTHAYLVP
IFNEIDEDAHYVQAIVTLPSRELADQLYQVARQLRDAAEMHFSIAHLAGGTDRERQLEKY
QNNTPQLVIATPGRLLDFVQKKVFVVDQVKTFVIDEADMTLDMGFLADIDQVASKMPKDV
QIAAFSATIPVKLSNFLRKYMAHPDQIVIDNPSIIAPTIKNDLLDIGSKNRKSVLYKLLT
MGQPYLALVFANTKQTVDELTRYLQDQGLKVAKIHGGVTERERKRTLRQVEQGQFQYVVA
SDLAARGLDIDGVSLVINYEIPRDIEFVIHRIGRTGRNGLSGHAITLIREEEMNRIEDLE
KMGVHFDFVEIKNGELVPRKHYRSRENRQGKNRKFDIKLVGYVKKEKRKRKPGYKKKIKR
AIQEDNRQKRKLEQRHEIRKAKRLRKRKREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatttttgcagattccagaattaaaccagctattcaagagggtttaaagaag
atccattttgaaaagccaactaaggtgcaggaaaaagttattccagcaatgctttctgat
ttaagtgttgtggtgcaagctgcaaccgggtcaggtaagacgcatgcttatttggtgcct
atctttaatgaaattgatgaagatgctcactatgtgcaagcaattgtgactttgcctagt
cgagagcttgctgatcaactttatcaagtagcacgtcaattaagagatgcggcagagatg
cacttttctattgcccaccttgctggtggaacggaccgtgaacgtcagttagaaaagtac
caaaataatacgccacagttggtaattgccactccgggacgacttttggactttgtacaa
aaaaaggtattcgttgttgatcaagttaagacttttgtcatcgacgaagctgatatgact
cttgacatgggctttttggctgatattgatcaagtagcaagcaagatgcctaaggatgta
caaattgcagccttttcagctactattccagttaagctatctaactttttgcgtaagtac
atggctcatccagatcaaatcgtgatcgataatccgagtataattgcacctacaattaag
aatgatttgcttgatattggctcaaagaatcgtaagagtgttttgtacaagttattgact
atgggtcaaccttacttggctttggtttttgctaatacaaaacaaactgttgatgaatta
actagatacttgcaagatcaaggcttaaaggtagctaagattcatggtggggtaactgag
cgagaaagaaagcggactttgcgtcaagttgagcaaggacaatttcaatatgttgttgcc
tctgacttagcagcccgtggtcttgatatcgatggtgttagtttagttattaattatgaa
attccacgtgatatcgaatttgtaattcaccggattggtcgtaccggccgtaatggttta
tcaggtcatgcgattactttaattcgtgaagaagaaatgaaccggatcgaagatttggaa
aagatgggcgttcatttcgactttgttgaaattaagaatggtgaattagtaccacgtaaa
cattaccgcagtcgtgagaatcgtcagggtaagaatcgcaagtttgatattaagttagta
ggttacgttaaaaaggaaaaacgtaagcgtaagcctggctacaagaagaagattaagcga
gcaattcaagaagataatcgtcaaaagcgtaagcttgaacaacgtcatgaaattagaaaa
gctaagcgtttgagaaagcgtaagcgtgaacaaggacgttaa
DBGET
integrated database retrieval system
