Lactobacillus helveticus R0052: R0052_03115
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Entry
R0052_03115 CDS
T02217
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lhr
Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhr03019
]
R0052_03115
Messenger RNA biogenesis [BR:
lhr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R0052_03115
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
MIB_HERC2
Motif
Other DBs
NCBI-ProteinID:
AFR21580
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All DBs
Position
540690..541667
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AA seq
325 aa
AA seq
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MLKRLLDYNDGEEMDIVVLIKNSQLRHNKKNNLYLAMQFGDDSGEIHGNYWDANNQDAAT
FSTGTIVELNGKREEYQGRPQIRIYSLRVVGPQEGYNLDQFIKSAPEPINEMEQEINNFV
AQIQNKTWKTIVEYLLKKWGKRFYDYPAGKSNHHAVRGGLAFHTLSMLKDAKGLADNYEQ
VNRSLLYAGCILHDMGKVLELTGPAATQYTTEGNLVGHLVLIDEQIMLAANDLDFDLESE
DLLLLRHMVLSHHGKFEYGSPKLPALLEAELLHRIDDLDAAVYAVTNALQHTPQGQFTEP
LLSQDGKRYYHPKHDPALEKARHLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacgattattagattataacgatggcgaagaaatggatatcgttgttttaatt
aagaattcacaattgcgtcataataagaaaaataatctttatttggccatgcaatttggt
gatgactcaggtgaaatccatggcaattattgggatgctaataatcaagatgcagcaacc
tttagtacaggcacaattgttgagctaaatggtaaaagagaagagtatcaagggcgccct
cagattcgcatttatagtttgcgtgttgtaggacctcaagagggctataatcttgaccaa
tttattaaatctgctcctgagccaattaatgaaatggagcaggagataaataatttcgta
gcacagattcaaaataagacttggaaaacaatcgtagaatatctgcttaaaaagtggggc
aaaagattctatgattatccagcaggtaagagcaaccaccatgctgttcgaggcggttta
gcatttcacacattatcaatgttaaaggatgctaaggggttagctgataattatgaacaa
gtcaatcgttccttgctttatgcgggatgtattttgcatgatatgggcaaagtattggag
cttacaggtccagctgcaacacaatacacaactgaaggaaatttggttggtcatttagtt
ttaatagatgagcaaattatgcttgcagctaatgacttggattttgatcttgaatcagag
gatttgcttttactcagacatatggtcttgtcgcaccatggcaagtttgaatatggttcg
cctaagttgccagctctgcttgaagctgaattgcttcaccgaattgacgatttagatgca
gcggtttatgctgtgacgaatgctttgcaacatacgcctcaaggtcaatttactgagcct
ttgcttagccaagatggcaagagatattatcaccctaagcatgatccagcattggaaaag
gcacgacatctagaatag
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