Lactobacillus helveticus R0052: R0052_04815
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Entry
R0052_04815 CDS
T02217
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhr
Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhr03016
]
R0052_04815 (truB)
Enzymes [BR:
lhr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R0052_04815 (truB)
Transfer RNA biogenesis [BR:
lhr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R0052_04815 (truB)
Prokaryotic type
R0052_04815 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFR21855
LinkDB
All DBs
Position
846120..847013
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AA seq
297 aa
AA seq
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MLNGILVIDKDKGMTSADVVYHLRKALHIRKIGHAGTLDPEVTGVLPIAIGQATKLIELM
HTRPKEYIGSGLFGYATDSYDSTGTVLKKTKLTQAFTSDDIQSHMNEFLGEIEQVPPIYS
AVKVNGKHLYEYAREGIAVERPKRKVDILQYDLTDKPVFNETEGQEKFDFRIKCSKGTYV
RSLVNDLGEKMNCPAVMTYLRRVASSGFDISQAVKLSEIEANPEKAVELIQPIDAFFKDY
PQIDLSEGKWLKVKNGAGISLEIDAKKVALRYNKKVKAIYEKKGKLYRPSLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggaattttagttattgataaagacaaagggatgactagtgctgatgtagta
tatcatttgcgaaaagctttgcatattcgaaaaattggacacgctggtacacttgatccc
gaagtaaccggagtattgcctatcgcaatcggacaagcaactaagttaattgaacttatg
catactagacctaaagaatatattggtagtggtttatttgggtatgctacagatagttat
gattcaacaggtacagttttaaaaaagactaagctaactcaagcttttacttccgatgat
attcaaagtcatatgaatgaatttttaggtgaaatcgaacaagtaccgccaatttattca
gcagtaaaagtaaacggcaagcatttatatgaatatgctcgagaaggaattgcagtagaa
cgacctaaacgtaaagttgatattttgcaatatgatttgacagataaacccgtatttaat
gaaacagaaggacaagagaaatttgattttcgaattaagtgtagtaaaggtacttatgtc
agatcattagtaaatgatttaggcgaaaaaatgaactgtcccgcagtgatgacttattta
agaagagtagctagttctggttttgatatttctcaagcagttaaattaagtgaaattgag
gccaatcccgaaaaagcggtagaattgattcagccaattgatgctttctttaaagactat
cctcaaattgatttaagtgagggaaaatggcttaaagtaaaaaacggtgcaggtatttcg
ttagaaatagatgctaaaaaggttgcattaaggtacaataaaaaagtcaaggcgatttat
gaaaagaaaggtaaattatatcgcccaagtttaatgttgcttcaaaatgaataa
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