Lactobacillus helveticus R0052: R0052_05180
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Entry
R0052_05180 CDS
T02217
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lhr
Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhr03400
]
R0052_05180
Enzymes [BR:
lhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R0052_05180
DNA repair and recombination proteins [BR:
lhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
R0052_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Phage_p2_ORF12
LAMB1
Motif
Other DBs
NCBI-ProteinID:
AFR21916
LinkDB
All DBs
Position
910543..914025
Genome browser
AA seq
1160 aa
AA seq
DB search
MIKILTGRQTDPLQEKILATAIENYQRHPENETFIIVPNHIKFTTEVRAINKLASSKKQT
ETAVKNLHVLSFSRLAWFFLKDAEQGLPTQLDDAASAMLLTHIIEQKQDDLIIFEQSNSG
MVRQLYNTILQVYDGNLDLDNIDETNLDQETKSKIHDLRIIYDAFIEEIAGKFSTKNEVQ
VQLNDILAKNFELKNASFYFCDFSHFSLQEMLTIQILMRKAKNVMLAFKTRLGNINPKAE
AGDYDYVIQQTIRRFVSFLQERDMDYVASEFPIPSEPTPREILNSLWTETVSKVDELKQV
QLVKADSRYAEAYFVARTIYQQVALNNYRYRDFLILAPDLKEYETYLTPILRQNNIPFFN
DLQQEMKYHPLVVLIENLFNLRDLKENPFQTQSMLAILKTHLLIPSWYKEEAEYIHDVDE
LENFVLAHGINHNLWKKHFADFVSAEVIRLDKIDEEVAKIDRLRGYLVDKVNNLFTKLEQ
EKDSQKALTIFFDFLTKNGIAERLEQWRDVANNAGDLQQAQQPEQLWDLLIQLLKDYLAI
NPEKFDLDEFFNMLISAFKEATFSQIPSTLDAVNLSEMGMVQTSGYKQVFIIGATSGNLP
SIEKKPGFLTTENLNQLQSSFESDAYLEDNQRLNNLDQNYQFGLSLALAQDRVYISYPVL
NASNEKLDPSIYYQRLQDYGAPEFSQHDLPGKMQELLSFITNPDASLGYLAYINSNTSDE
AIDELLKITQKYLPQKVKAVLDASDFDNQPEDIGEDLAAELYGKNLYSSVSQLETFYENS
YEYFLTYGLKLRRRLENEFDVIQAGNYFHETFDRLVKRLNEQHIDLADLSSVELEQQLNQ
VRDVIKDESKYAQLMNDPFNQYLFHCLDHTTSKVARNWRKSLAETPLRAKYSELSFGLDQ
KIKGISLDIPDLAGNHQVNLRGKIDRVDLANFAEKDQVLAQVIDYKSSAKKFDLGMFYNG
IALQMVSYLDVLTNNNRFFAEEDKLSLLGAFYQTVTRQLERLNSNKLIDSSLNLRENAID
SKPKLMYTGLISNNPEILLEAEPLLDGKSSQASQLYTGVGTKARGGFKLPADRNFSEEEL
QLLLEYDEYLIKEASRQILSGQIKLNPYRYGRNKNALTYSDFKDIFFFDAMLRHNQYHEI
SNMSKKDLLVKIKEKLGKKD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaattctaacaggacgacaaactgacccattacaagaaaaaattctggccaca
gcaattgaaaattatcaacggcatccagaaaatgaaacttttatcatcgttcctaatcat
attaagtttaccacagaagttagggcgattaataaacttgcgtctagcaaaaagcaaact
gaaacagcagtaaaaaatctgcatgtattatctttttcccgtcttgcatggtttttctta
aaagatgcggaacaagggttgcctacgcagttagacgatgcggccagcgcaatgttgcta
actcatattattgagcaaaagcaagatgacctgattatctttgagcaaagcaattcaggt
atggtgcgccagctttataatacgattttgcaagtatatgatggcaacttagacttggat
aatatagacgaaacaaatctggatcaagaaactaaaagcaaaattcatgatttgcggatt
atttatgatgcctttattgaagaaatagcgggcaaattttcaaccaaaaatgaagttcag
gtacaattgaacgatattttagctaaaaattttgaattaaaaaatgctagcttttatttc
tgtgatttttctcatttttctttgcaggaaatgttaaccattcaaattctgatgagaaaa
gctaaaaatgtaatgttggcttttaaaactagattaggaaacatcaatcctaaagcagaa
gcaggggactatgattatgtaattcaacaaacaattcgccgattcgtctcatttttacaa
gaaagagacatggattatgtagcaagtgaatttccaattccttctgaacctactccccgc
gaaattttaaatagcctttggacagaaactgtttctaaagtagatgaattaaagcaggta
caactggttaaagctgattctcgttatgcggaagcatattttgttgcacggacgatttat
caacaagttgccttgaataattatcggtaccgggatttcttgatcttggcgccagatttg
aaagaatatgaaacctatttaacgcctattttgcgtcagaataatattcctttctttaat
gatttgcaacaagagatgaaatatcaccctctagttgtgttaattgaaaatttattcaac
ttgcgtgatttaaaagagaatccatttcagacgcagagcatgcttgctatattaaagacg
catttgcttattccatcttggtataaagaagaagctgagtatatccatgatgtagatgaa
ttagagaacttcgttttagctcacggaattaaccataatttatggaaaaagcattttgcg
gattttgtgagtgcagaagtcatcagactagataagattgatgaagaagttgcaaaaatt
gatcgattacgtggttacttagtagataaagttaacaatttatttaccaaattagagcag
gaaaaagatagtcaaaaggctttaaccatattctttgactttttaactaaaaatggaatc
gcggaacgattagaacagtggcgggatgttgcaaataatgctggtgatctgcagcaagcg
caacaacctgaacaattatgggatttgttgatccagctgttaaaagattatcttgcgatt
aacccagaaaagtttgatttagatgaatttttcaacatgttgattagtgcctttaaggaa
gctactttttcacagattccttcaacgcttgatgctgtcaacttatcagaaatgggaatg
gttcaaactagtggttataaacaagttttcattattggagcaacaagtggtaatttaccc
tcaattgaaaaaaagccgggctttttgacgacggaaaacttgaatcaattgcaaagtagt
tttgaatcggatgcatatttggaagataatcagcggttaaataatttagatcaaaattat
caatttggattatctttagctttagcacaggacagagtgtatatttcttatccggtctta
aatgcatcgaatgaaaaattagatccgtcaatttattatcaacgtttgcaagattatggc
gcacctgaatttagccaacatgatttaccaggaaaaatgcaggagcttttatctttcatc
actaatcctgatgctagtttaggctatttagcgtatataaattctaatacttcagatgaa
gcaattgacgagctactgaaaatcacacagaaatatttgccacaaaaagtaaaggccgta
ctcgatgcgagtgattttgataatcagcccgaagatattggagaagatttggcagcggaa
ttatatggtaaaaatctatattcatctgtttcgcagttggaaactttttatgaaaattct
tatgaatatttcttgacctatgggttgaaattacgtcgtcgtcttgaaaatgaatttgat
gttattcaagcaggaaattatttccatgagacatttgatcgcttagttaaacggttaaat
gaacagcatattgatttagctgatttaagcagcgtagaacttgaacaacagcttaatcaa
gttagggatgttatcaaggatgagagtaaatatgctcagttgatgaatgatccgtttaac
cagtatttattccattgtttagatcacacaacttctaaggtggcccgaaattggcgcaaa
tcattagccgagacgccgctgcgagctaaatattctgaattgagctttggcttagatcaa
aagatcaaaggcattagtttggatattccagatttggctggcaatcaccaggttaacttg
cgtgggaaaatagaccgagtagatttagctaattttgctgaaaaagatcaagttttagct
caagtaatcgattataaatcttcagccaagaaatttgatttggggatgttttataatggt
atcgctttgcagatggtttcatatctagacgttttaactaataataatcgtttctttgct
gaagaagataagctttcacttttaggagcattttatcaaacagttactagacaattggaa
agattgaatagcaataagttaattgatagtagtttaaacttacgtgaaaacgcgatagat
agtaaacctaagctgatgtatacaggtctaattagtaataatccagaaattttactagaa
gctgaaccactattagacggcaagtctagtcaagcttctcagctttacactggagtagga
accaaggccagaggcggctttaaactgccagcagatcgcaactttagtgaagaagagctt
caattattgctagagtatgatgaatatcttatcaaggaagcatctagacaaattttatcg
ggtcaaattaagttgaatccataccgctatggcagaaacaagaatgctttaacgtattca
gattttaaagatattttcttctttgatgccatgcttagacataatcagtatcatgagatt
agtaatatgagtaaaaaagatttgttagttaaaattaaggaaaagctaggaaagaaggat
tag
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