Lactobacillus helveticus R0052: R0052_06215
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Entry
R0052_06215 CDS
T02217
Name
(GenBank) ABC transporter ATPase component
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lhr
Lactobacillus helveticus R0052
Pathway
lhr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
R0052_06215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lhr02000
]
R0052_06215
01504 Antimicrobial resistance genes [BR:
lhr01504
]
R0052_06215
Transporters [BR:
lhr02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
R0052_06215
Antimicrobial resistance genes [BR:
lhr01504
]
Gene variants
Macrolide resistance genes
Transporters
R0052_06215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_23
AAA_22
AAA_29
NACHT
NB-ARC
RsgA_GTPase
nSTAND3
TsaE
KAP_NTPase
IF2_N
nSTAND_NTPase5
ABC_tran_Xtn
dNK
T2SSE
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
AFR22078
LinkDB
All DBs
Position
complement(1092067..1093581)
Genome browser
AA seq
504 aa
AA seq
DB search
MSNIRISNLSFRYDDSSENIFNNLNLNLDSTWKLGLVGRNGRGKTTFLNLLRGKLHGLGD
IQTRLNFSYYPIKIADPANITLYELQKQTNFEEWELDRELNLMNVNPDLLWQPFNTLSGG
EQTKVLLALSFTNKDSFALIDEPTNHLDEDSRQEISNYLGKHEKGYIVVSHDRDFLNQVT
DHILAIENTEIHLYQGNFATYEDTKQKRDEFNRERNQKLKGEINELHQQKEQFYHWAQKV
EARKNIGRKYQHVLNRRTRLNKGAIGHAAAKMMKKSINARDRMDHKIQAKQGLMTNIEDI
PELSMNFKANYHSTLLEIQHLDLQIDGKSLFKDLNLVVKNHGVVSLEGRNGSGKSTFLKM
LLDKAPTVKYQGKYELADGLSISYLPQDFTEYKGTLHNFAYEHKISYEELLNNLKKLGFP
RASFATLIEEMSMGQQKRVALAKSLVEPSDLYLWDEPANYFDVFNQDQLIELLKKVKPAM
LLIEHDEYFIEQVADQRVRLDIAE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacattagaatttcaaatttgtcttttagatatgatgacagcagtgagaatatt
tttaacaatttaaacctgaatctagatagtacttggaaactggggttagttggcagaaac
ggtcgcggtaagactacatttttaaacttgctgcgtggaaaactacatggtctgggcgac
attcaaacccggttgaatttttcatattatccgattaaaattgctgatcccgctaacatc
actttatatgagttacaaaagcaaactaattttgaagagtgggagctagaccgtgaatta
aatttgatgaacgttaatccagacttgttatggcaaccgtttaacactttaagtggcggc
gagcagactaaggttttactagcgttgtcttttacaaataaggattcttttgccttgatt
gacgaacctacaaatcatcttgatgaagatagcagacaagagattagcaattatctaggt
aagcatgagaagggctatatcgtggttagtcacgatcgtgattttttgaatcaggtgacc
gaccatattttggcgattgaaaatacggagattcatttgtatcaggggaactttgcgaca
tatgaagatacaaagcagaagagggatgagtttaaccgagagagaaatcaaaagctgaag
ggtgagattaacgaattacatcagcaaaaggagcaattttatcattgggcccagaaagta
gaggctagaaaaaatattggtcgaaaatatcagcatgttcttaatcggcgaactagatta
aataaaggagccattggtcatgcggctgccaaaatgatgaagaagtcgattaacgctcga
gatagaatggatcataagattcaagctaagcagggcctaatgactaacattgaagatatt
cctgaattaagcatgaatttcaaggctaactatcattccactttgcttgaaatccaacat
cttgatcttcaaatagatggtaaaagtttatttaaagatttaaatttagtggtcaaaaat
catggagttgtttctcttgaaggacgaaatggttcaggtaaatcgacttttttgaaaatg
ctgctagataaagcaccaacagttaaataccaaggtaagtatgaattagctgatggttta
tcaatttcttatttgccacaggactttacagagtataagggaactttacataattttgca
tatgaacataaaatttcttatgaagaattgctgaataatttgaaaaagctgggctttccc
cgagccagttttgcaacgctgattgaagaaatgagtatgggacaacagaagcgagtagca
ttggctaagtcgctagttgaaccgtccgacttgtatttgtgggatgaaccggctaattat
tttgatgtttttaatcaagatcaactgattgaattattgaaaaaggtcaaacctgctatg
ctgcttattgaacacgatgagtatttcattgagcaggtggcggatcaaagagtgagattg
gatatagcagaatag
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