Lactobacillus helveticus R0052: R0052_07800
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Entry
R0052_07800 CDS
T02217
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lhr
Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhr03009
]
R0052_07800
Enzymes [BR:
lhr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
R0052_07800
Ribosome biogenesis [BR:
lhr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
R0052_07800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AFR22338
LinkDB
All DBs
Position
complement(1368057..1368767)
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AA seq
236 aa
AA seq
DB search
MRIDKYLANMNVGSRKEVHVLIKKGIVTVNGDVVKTPKQQVKESDEVLVDGQEVNYQKYH
YFLMNKPKGVLSATEDRSQRTVISLLKPQDQYQGITPVGRLDKDTTGLLLLTNDGQLNHE
LLAPNKHVDKIYRAKIAGVADDETVKTFASGMTLGDGTKLKPAELKILAQDEEHDSSEIE
IKIREGKYHQIKRMFGAVGMKVVELERISMGKLKLPKYLKRGNYIELSLDDVSKIK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgataaatatttagctaatatgaatgtcggctccagaaaagaagtgcacgtt
ttaattaaaaaaggcattgtcactgtaaatggtgatgtggtaaaaacaccaaaacagcag
gttaaggaatccgatgaagtattggtagatggccaagaggtcaattatcaaaaatatcat
tacttcttgatgaacaagcccaagggcgtactttcagcgactgaagaccgtagtcaaaga
acggtaatctcattgctcaagccgcaggatcaatatcaaggaattacgccggtaggacga
ttggataaagatacaaccggcttgctgttacttactaatgatggtcaactaaatcatgaa
ttgcttgcacctaataagcacgttgataaaatttatcgtgcaaaaattgcgggtgtggct
gatgacgaaacggtgaagacctttgccagtggcatgactttaggtgatggaactaaactt
aagccagcagagttgaagattcttgcccaagatgaagagcatgatagctctgaaattgag
attaaaattcgtgaaggaaaatatcatcaaattaagcgcatgtttggtgcggtagggatg
aaagtagttgaacttgaacgaatttcaatgggtaaattgaagttgccgaaatatttaaag
cgcggtaattatattgaattgagtttagatgatgtaagcaagattaaatag
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