Lactobacillus helveticus R0052: R0052_08945
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Entry
R0052_08945 CDS
T02217
Name
(GenBank) ABC transporter ATPase/permease
KO
K18891
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lhr
Lactobacillus helveticus R0052
Pathway
lhr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
R0052_08945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lhr02000
]
R0052_08945
Transporters [BR:
lhr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
R0052_08945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
DUF87
AAA_22
NB-ARC
nSTAND3
AAA_30
AAA_16
AAA_18
AAA_5
ATP-synt_ab
AAA_15
NACHT
Zeta_toxin
AAA_14
Wzy_C
DUF948
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AFR22540
LinkDB
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Position
complement(1587518..1589248)
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AA seq
576 aa
AA seq
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MQAFKILVPHFKHYKKDIFAALIAIIISAFATVYQPKLLENIQRAIILDQKDIVARDGVI
LVVLGIVAIISGIFNVYYAARIAQGVTSDLREETYAKIQSFSFGNIEKFSAGSLTTRLIN
DMNQIMNMLMQLFMQLLRMPILIVGSFIFCIVIIPRFWWATVVMVILIIGFGIYVLKQMN
SLFDKFQKTMDKISGRAQETLQGVRVVKSFNHGPQEIKKFNQTSDRLNNYNIVIGYWFST
IMPAFQLIAYLVITLVVYLIGQGIAAHPTDVAVVSPFVNYILTLLWTIMIAGMTMMQFAR
SNISLGRIKEILDTEPDVKFNENAPTDVLGGSVEFDHVSFTYPDGDDETLKDISFKIKPG
QMVGIVGATGSGKSTLAQLIARLYDPTKGEIKIGGHNLKDVNETALRKTVAFVLQRAILF
SGTIASNLRQGNSRAKLHELQRAANMAQASEFIERYNDSFDHEVEERSSNFSGGQKQRLS
IARGLVAKTPILILDDSTSALDAESEKKVQQALEHELPDTTTFIIAQKIVSVVHADIILV
LDDGKLVAQGTHEELLKTSPVYQEIFKTQKGKRGGK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcattcaaaatcttagtaccacattttaaacattataagaaagatatttttgca
gctttaattgcaattattatttcagcttttgcaacagtatatcaaccaaaattattagaa
aatattcagcgagcaattatattggatcaaaaagacatcgttgctcgtgatggcgttatt
ttagttgtattgggaatcgttgccattatttcgggtatttttaatgtgtattatgcagct
agaattgcccaaggcgtaactagtgacttgcgtgaagaaacttatgccaagattcaaagt
ttctctttcggcaatattgaaaaattctctgcaggttcactgactacgcggttgatcaac
gacatgaatcagatcatgaacatgttgatgcaactttttatgcaattgctcagaatgcct
atcttaattgtaggatcttttattttttgtatcgtgattattccacgattttggtgggca
actgtagtaatggtgatcttgatcatcggcttcggtatctatgttttaaaacaaatgaac
agcttgtttgataaatttcaaaagacgatggataaaatttctggtcgtgcacaagaaact
ttacaaggcgttcgtgtagtgaaatctttcaaccatggtccacaagaaattaagaaattt
aatcagacttcagatcgtttgaataactataacatcgtgattggttattggttttcaacg
attatgccggcctttcagcttattgcatatttagtgattacgctggtagtttatctgatt
gggcaaggcattgcggctcatcctactgatgtagcagttgttagtccatttgttaactat
atattaaccttgctatggactattatgatcgccggaatgaccatgatgcaattcgccaga
agtaacatttccttaggtcgtattaaagaaatacttgatacagagccggatgttaaattt
aatgaaaatgctccaactgatgttttgggtggctctgttgaatttgatcacgtgtcattt
acttatcctgatggcgatgatgaaaccttaaaagatatttcatttaaaatcaaaccaggt
caaatggttggtatcgtaggtgccacaggctcaggtaaatcaaccttggctcaactgatt
gctcgtctttatgatccaaccaaaggtgaaatcaagattggtggtcataatttaaaggat
gttaatgaaacagccttgcgtaaaaccgtggcgttcgtattgcaacgtgctattctgttt
tcaggcaccattgcttctaatttgcgtcagggtaactctagggcaaagctgcatgaattg
cagagagcagctaatatggcacaagcatctgaatttattgaacgttataacgattcattt
gatcatgaagtagaagagcggtcatccaatttctcaggtggtcaaaagcagcgtctatct
attgcacgtggcttggttgctaaaacaccgattttaattttagatgactctacttctgca
cttgatgcggaatctgaaaagaaagttcaacaggcgttagaacatgaattgccagataca
acgacgtttattattgcgcaaaagatcgtgtcagttgtacatgcagatataattttagtt
ttagacgatggaaaactggttgcacaaggtactcatgaagaattattaaaaacttcgcca
gtttaccaagaaattttcaagacacaaaaaggcaagagaggaggcaaataa
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