Lactobacillus helsingborgensis: DLD54_00030
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Entry
DLD54_00030 CDS
T06906
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lhs
Lactobacillus helsingborgensis
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhs03032
]
DLD54_00030
03400 DNA repair and recombination proteins [BR:
lhs03400
]
DLD54_00030
Enzymes [BR:
lhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DLD54_00030
DNA replication proteins [BR:
lhs03032
]
Prokaryotic type
DNA Topoisomerases
DLD54_00030
DNA repair and recombination proteins [BR:
lhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DLD54_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AWN32659
LinkDB
All DBs
Position
6786..9272
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AA seq
828 aa
AA seq
DB search
MDNDNQGQDHRIRNVDLTSVMNSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELG
VTPDKPYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDE
PAAMRYTEARMSKIAVEMLRDINKNTVNWQRNYDDSENEPVVLPARIPNLLVNGTSGIAV
GMTTNIPPHNLSEVIKGLHMLMNNPAVTTKELMKAIPGPDFPTGGTIMGRGGIYRAYETG
RGNIVVRANTNIETEKSGRERIVVTEIPYLVNKAELVKKIADLARAKTIDGITGVRDESD
QTGMRITIDIRRDASASVVLNNLFKLTQMQANFGMNMVAIVDGAPHFLSLKQMLQYYLEH
QEDVVTRRTKFELAKAEARAHILEGLKIALDHIDEIVHIIRQSQSSDIAKAALISRFGLD
DKQSQAILDMRLVRLTGLERDKVEAEYKELQAKIADYKDILAKPERINEIIYNELLDIQK
RFGDDRRTKIGASEVVSIEDEDLIEKQDVLLTLTHSGYIKRMPITEFKTQNRGGKGIKGM
GVKDGDFIENLIYSSTHDMLLFFTNKGKVYSKKAYEIPEFGRTAKGLPIVNLLQLEKGEK
IQTIVNIPEDADDQYLFFITKMGTVKRTHVSEFGNIRNSGLIALTLRDGDELNNVLATDG
KQDILIGTHLGYAVRFNEQTVRSMGRTAAGVRGINLRENDYVVGSGVIKNSDEVLVISEK
GYGKRTAAAEYPTKGRGGKGIKTANITEKNGPLSGVTVIDGSQDIMVITDDGIMIRFKTK
DVSQTGRSTLGVRLIKVNDNNKVASLAVVPAEEDQEVAAAEETDSEQD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacaatcaaggtcaagatcacagaatacgaaacgttgatttgaccagcgta
atgaatagttcattcttggattatgccatgtccgttatcgtcgcacgggctttacccgat
gtgcgtgatggcttaaagccggttcaacgccggattttatatggtatgagtgaactaggt
gttacaccagataaaccatacaagaagtctgccagaattgtaggggaagttatgggtaaa
ttccaccctcacggtgattcctcaatttatttggcaatggctcatatggcccaagacttc
agctaccgctatatgctcgttgacggacacggcaattttggttcggttgatggtgatgag
cccgccgcaatgcgttacactgaggcacgcatgagcaaaatagccgttgaaatgctgcgg
gatatcaataaaaacactgttaattggcaacgtaattatgatgattctgaaaatgaaccg
gtggtattgccggctagaataccaaatcttttagttaacggcactagcggtattgcggtt
ggtatgactaccaatatcccgccacacaacctttctgaagtgattaagggactgcacatg
ttaatgaataatcctgctgtcactactaaagaactgatgaaggcaatcccaggtcctgat
tttcctacaggcggaacgatcatgggtcgcggcggcatatatcgcgcctatgaaactggt
cgcggcaatattgttgtccgtgctaataccaatattgaaactgaaaaaagtggccgtgaa
agaatagttgtcactgaaataccatacttggttaataaagcagaactggttaagaaaatt
gctgatttagcgcgtgcgaagacaattgatggtattaccggtgtgcgggatgaatcagat
caaacggggatgagaattaccattgatatccgccgtgatgccagcgctagtgtggtttta
aataacttgtttaaactgacacaaatgcaggctaactttggtatgaatatggtagcaatc
gtcgatggcgcaccgcactttttaagcctcaagcagatgctgcaatattatttggagcac
caagaagatgttgttacccgtagaactaaatttgaattagctaaagccgaagctagagca
cacattcttgaaggtctcaaaattgcccttgatcatattgacgaaatcgtccacatcatt
cggcagagtcaatcaagtgatattgctaaagctgccttaatcagtcgttttggtcttgat
gacaagcagtcacaagccattttagatatgcgcttggtacggttaacgggtcttgagcgt
gacaaggttgaagctgaatataaagaactacaagctaaaattgccgactataaagatatt
ttggcaaagccggagcgcattaatgaaataatctacaatgaattgctggatattcaaaag
cgctttggtgatgatcggcggactaagatcggtgccagtgaagttgtttcaattgaagat
gaagatttaattgaaaaacaagatgttttactaaccttaactcatagtggctacattaag
cggatgccaattactgaatttaagactcaaaatcgtggtggtaaaggtattaaaggcatg
ggcgttaaagacggtgactttattgaaaacctcatttactccagtacgcatgatatgtta
ctgttttttaccaacaagggtaaagtttattcaaagaaagcctatgaaattccggaattt
ggccgtacagctaagggtctcccgatagtcaacttattgcaactggaaaagggcgaaaaa
atccagacaattgtcaatattcctgaagatgcggatgaccaatacttattcttcattaca
aagatggggacggtcaaacggacacatgtcagtgaatttggcaatatccgtaacagcggc
ctaattgctttaaccttgcgtgatggcgatgagttgaataatgtcttggctactgatggc
aaacaagatattttaattggtactcacttaggttacgccgtgcgctttaatgagcagaca
gttcgttcaatgggccgcacagcagctggcgttcgcggaattaatttacgcgaaaatgac
tatgtagttggctctggcgtcattaagaatagcgatgaagtgttagtcatttctgaaaag
ggttacggcaagagaacagcagctgccgaatacccaactaaaggtcgcggcggaaaaggt
atcaagactgcaaatattaccgagaaaaatggtccactctctggtgtaacagtgatcgat
ggcagccaggatatcatggtgattactgatgatggtatcatgatccgctttaagacaaag
gatgtttctcaaacaggtcgcagcactttgggcgttcgtttgatcaaagttaatgacaac
aataaagttgccagtcttgcggtagttcctgccgaagaagatcaagaagttgctgcagct
gaagaaactgacagtgagcaggattaa
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