Lactobacillus helsingborgensis: DLD54_01745
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Entry
DLD54_01745 CDS
T06906
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lhs
Lactobacillus helsingborgensis
Pathway
lhs03030
DNA replication
lhs03430
Mismatch repair
lhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLD54_01745
03430 Mismatch repair
DLD54_01745
03440 Homologous recombination
DLD54_01745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhs03032
]
DLD54_01745
03400 DNA repair and recombination proteins [BR:
lhs03400
]
DLD54_01745
Enzymes [BR:
lhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLD54_01745
DNA replication proteins [BR:
lhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DLD54_01745
DNA repair and recombination proteins [BR:
lhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DLD54_01745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
AWN32973
LinkDB
All DBs
Position
366065..367018
Genome browser
AA seq
317 aa
AA seq
DB search
MSIYVKNGVLHVSGVQDKIRGKGQEWPDFIADYTMLDIETTGLNPYRDHVTEMGAVKVRN
NKVVDEFSQLVVYPRSNRVPSFITKLNGITEELLLKEGKPVKEVMKSFRSFIGDDIIIGY
NVNFDLNFLYDLTQKFHLPELNNDYVDVLRLARVYYPKQHNRLLDCIQRAGIAQVEQHHG
LDDSLDTKKVYDDFRQHFTPELLEKAQGKLKNFDLLQDELETWELGFRNPVNNKKIAFAP
EVEIDAAEAAQMVNNMNGIAQTGVKADTDYLIMSDDGFFSKSNAEALKAKEFNRAGSKIK
RLSESYFLNMLDEWARS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacgtaaaaaatggcgtgctgcatgtttctggcgttcaagataaaataagg
ggcaaagggcaggaatggcctgattttattgcagactataccatgcttgatattgaaacc
acgggtttaaacccatatcgcgatcatgtgaccgaaatgggcgcagttaaagtacgtaac
aataaggtcgtggatgaatttagccagttggtagtttatccgcgttcaaaccgtgttccc
agttttatcactaagttaaacggtattactgaagaactgctgcttaaagaaggaaagcct
gtaaaagaagtaatgaagtcttttcgcagttttattggtgatgatattatcattggttac
aatgtcaattttgacttgaatttcctgtatgatttaacgcaaaagtttcatttgcctgaa
ctgaataatgactatgttgatgttttgcgtctagctcgcgtttattatcccaagcagcat
aaccgcttgcttgactgtattcaacgcgcgggtattgcccaagtagagcagcatcatggt
ctggatgattctcttgatactaaaaaagtttatgatgattttcgccaacattttacgccc
gaacttttagaaaaagcacaaggcaaactaaaaaactttgatttattacaagatgaactt
gaaacttgggaattgggttttcgtaacccggttaacaataagaagattgcttttgctccc
gaagtagaaatagatgctgctgaagctgcacaaatggttaataatatgaacgggattgcg
caaactggggttaaagcggatactgattatttaatcatgagtgatgatggcttttttagt
aaaagcaatgcggaagctctcaaagcgaaagaatttaatcgcgctgggagtaaaattaag
cgtctgtctgaaagctatttcttaaatatgcttgatgaatgggctaggagttaa
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