Lactobacillus helsingborgensis: DLD54_02640
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Entry
DLD54_02640 CDS
T06906
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhs
Lactobacillus helsingborgensis
Pathway
lhs03420
Nucleotide excision repair
lhs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DLD54_02640 (pcrA)
03430 Mismatch repair
DLD54_02640 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhs03400
]
DLD54_02640 (pcrA)
Enzymes [BR:
lhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DLD54_02640 (pcrA)
DNA repair and recombination proteins [BR:
lhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DLD54_02640 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DLD54_02640 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
YMR265C_C
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AWN33109
LinkDB
All DBs
Position
522472..524715
Genome browser
AA seq
747 aa
AA seq
DB search
MNAESILTGLNPQQKKAVKITEGPLLVVAGAGSGKTSVLTRRIAYLVAEKEVAPWNILAI
TFTNKAASEMRQREQKLLGVRADSIWMSTFHALCVRILRRDAEKIGYTGNFSIADSAEQL
TLIKHIEKEQNINPKMYEPRRILAAISNGKNDLLTPDAYAASAASPFEKITARVYQEYQR
RLKHDQIMDFDDLIMQTLVLFKSDNTVLHYYQNKFRYILVDEYQDTNQAQYELCHALAAQ
YKNICVVGDADQSIYGWRGANMENIMNFEQDYRDAGVQTVKLEQNYRSTGHILAAANAVI
KNNSHRKAKNLWTDQGEGAKVTYYRAQSGDDEAHFIIAKIQEEVKTKKRSYNDFAVLYRT
NAQSRTVEESFVKSNVPYQIVGGHKFYDRKEIMDIMAYLKLVANPSDTMSFNRIINTPKR
GIGPVSVRRFLDFAQENNLTLLEAFNHLNMSGVSPRAAAKLSDFGAKLRDAISYAAGHSV
TGLTEKVLQDFGYTAALKSEHTIEAETRLENLDEFLSVTKRFDDEYEESAAGDNALSDFL
AEVSLLSDQDDLANNDDQVALMTLHAAKGLEFPVVFLVGMEDGLFPLSRSLMEDDQLEEE
RRLAYVGITRAKQELFLTNAYSRMMYGRMQNNLPSRFLAEIDQEDLNTENSVPIDLTSAN
FQTTTAPFANSDERARAQVYTPKVKPSGAVGAEKKGWNVGDQVEHKAWGKGVVTKVNGKG
EDMELDIAFSGKGIKRLLAAFAPIKKV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagaatcaattttgacaggattaaatccacaacaaaaaaaggcagttaagatt
acggaaggaccattattggttgttgcaggagccggttctggcaaaacatctgtattaact
cgccgaattgcttatttagttgctgaaaaagaggttgcgccctggaatattttagctatt
actttcactaataaagcagctagtgaaatgagacaaagagaacagaaattactgggtgtc
cgcgccgatagcatttggatgtctacttttcatgctctttgtgtacgtattttaaggcgg
gatgctgaaaaaatcggctatactggtaatttttcaattgctgattctgcagagcagctt
acgttgattaagcacattgaaaaagagcaaaatattaacccgaagatgtatgaacctaga
agaatcctagcggcaatttctaacggaaagaatgatttgcttacgccagatgcctatgca
gctagtgcggcttcaccttttgaaaagataactgcaagggtatatcaggaatatcagaga
cgcttaaagcacgatcaaattatggattttgatgatttgattatgcagactttggtttta
ttcaagagcgataatacggttttacattattatcaaaacaagtttcgctacatcttggta
gatgagtaccaggatactaatcaagcccaatatgaattatgtcacgcactggcagcccaa
tacaaaaatatttgtgttgtgggcgatgctgatcagtctatctatggttggcgcggcgct
aatatggaaaatattatgaattttgagcaagactatcgtgatgccggtgttcaaacagtt
aagcttgaacaaaattatcgctcaacaggtcatattttagcagctgcgaatgcggttatt
aagaataacagtcaccgcaaggctaagaacttgtggactgatcaaggtgagggtgccaaa
gtaacatattatcgtgctcaaagtggcgatgatgaagcccattttattattgctaaaatt
caggaagaagttaaaactaaaaagcggtcttacaatgattttgcggttttataccgtaca
aatgcgcaatccagaactgtagaagagtcttttgtaaagtcaaatgtgccttaccaaata
gttggtggtcataaattctatgatagaaaagaaattatggacattatggcttatttgaag
ctagtagctaatccgagtgacacaatgagttttaaccggattattaatactcccaaaaga
ggtattggaccagtgagcgtacgccgctttttagattttgcccaagaaaataatttgacg
cttctcgaagcgtttaatcatctaaatatgtcgggagtttcacctcgcgccgccgccaaa
ttaagcgacttcggagctaaattacgtgatgcaattagttatgctgcaggtcatagcgtt
accggtctaactgaaaaagtcctgcaggattttggctatacagctgcgcttaagtctgag
catactattgaagctgaaaccagactggaaaaccttgatgaatttctatcggtaacaaag
cgttttgatgatgaatatgaggaaagtgctgcaggtgacaacgcacttagcgatttttta
gcggaagtgtcccttttaagtgatcaagatgatttggccaataatgatgatcaagtagca
ttgatgaccttgcatgcggcaaaaggcttggaatttccagtggtctttttagtcggaatg
gaagacggactctttcctttatcaaggtctttaatggaagacgaccagctggaagaagaa
agacgattggcctatgttggcattaccagggctaaacaagaattgtttttaactaacgca
tattcacgaatgatgtacgggcggatgcaaaataacctgccttcaagatttttggcagaa
attgatcaagaagatttgaacaccgaaaattctgtgccaattgacttaactagtgccaat
tttcaaactacaacagcaccatttgctaatagtgatgagcgtgctcgagcacaggtatat
acacccaaagtcaaaccatctggagctgttggcgccgaaaagaagggttggaacgttgga
gaccaagttgaacataaagcttggggtaaaggcgttgtcaccaaagttaacggtaaaggt
gaagatatggagcttgatattgcatttagtggtaaaggaatcaaacggcttcttgcagca
tttgcaccaattaaaaaggtataa
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