Lactobacillus helsingborgensis: DLD54_04085
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Entry
DLD54_04085 CDS
T06906
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lhs
Lactobacillus helsingborgensis
Pathway
lhs03030
DNA replication
lhs03430
Mismatch repair
lhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLD54_04085 (holA)
03430 Mismatch repair
DLD54_04085 (holA)
03440 Homologous recombination
DLD54_04085 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhs03032
]
DLD54_04085 (holA)
03400 DNA repair and recombination proteins [BR:
lhs03400
]
DLD54_04085 (holA)
Enzymes [BR:
lhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLD54_04085 (holA)
DNA replication proteins [BR:
lhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DLD54_04085 (holA)
DNA repair and recombination proteins [BR:
lhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DLD54_04085 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
YagK_YfjJ_C
sCache_4
McdB_C
Motif
Other DBs
NCBI-ProteinID:
AWN33384
LinkDB
All DBs
Position
856626..857612
Genome browser
AA seq
328 aa
AA seq
DB search
MTLLSLFKNSQQNTLNTLISGSDTFLNDYLAKSYLQEEQFSDYERVMVDCETDGLDNLIA
ALTESSLFSQKKVLTVKNPFFMTAKVPQKYHKQVEQLQNIFENSSQLDDVIIMVASYEKL
DRRKKITKIITQNFNVVEAQVKPYELKKVVRGLITSEKYQITDDALKLLLERSDQVLDTV
LSNYNKLKMAAIDQKITTALVEKNTDLSLAQNIFAILEVALRKNYQEALTRLDNQLHNGN
SPVQLLAVFENQIEFILVVKVLQSRGRSEAEIVRELGVHPFRVKVALRNNIGLQKLEKLL
QEAIKLDFNYKNGQYRSENFLRLFILSV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgttactttctttatttaagaattcccaacaaaacactctaaatacgcttattagt
gggtctgatacttttttaaacgattatcttgctaaatcctatctgcaggaagaacaattc
tcagactatgaaagggtaatggttgattgtgaaacagatggattagataatttaattgca
gctctcactgaatcgagcctttttagtcaaaaaaaagtgctgaccgttaagaaccctttt
tttatgaccgctaaagtaccacaaaaatatcataaacaagttgagcaattacaaaatatt
tttgaaaatagttcccaactggatgatgtgataataatggtagcgtcatatgaaaaactg
gatcggcgcaagaaaataactaaaattattacgcagaattttaacgtcgtggaagcccaa
gtaaagccttatgaactgaaaaaagtagtcagaggactgattacaagtgaaaaataccaa
ataacagacgatgcccttaaattgcttttagagcgtagcgatcaagtgctggatacggtt
ttgagtaactacaataaactgaaaatggcggcaatcgatcagaaaatcacaactgcatta
gttgaaaagaacactgatttgtcactagcacaaaatatattcgctattttagaagttgct
ttaaggaaaaattatcaagaagcactaacacgtttagataatcaactacataatggtaac
agtccagtgcagcttttagctgtttttgaaaaccaaatagagtttattttggtggtaaag
gtgttgcaatccagagggagaagtgaggcagaaattgtgcgtgagttaggtgtacaccca
tttcgagttaaggtggctctcaggaataacataggtttacaaaaattagaaaaattatta
caagaagccattaaacttgattttaattataaaaacggacaatatcgcagtgagaatttt
ttaagactttttatcctgagtgtttga
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