Lactobacillus helsingborgensis: DLD54_04145
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Entry
DLD54_04145 CDS
T06906
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lhs
Lactobacillus helsingborgensis
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhs03016
]
DLD54_04145 (rnz)
Enzymes [BR:
lhs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DLD54_04145 (rnz)
Transfer RNA biogenesis [BR:
lhs03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DLD54_04145 (rnz)
Prokaryotic type
DLD54_04145 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Pox_T4_N
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AWN33396
LinkDB
All DBs
Position
871562..872503
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AA seq
313 aa
AA seq
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MELQFLGTGAGQPSKKRNVSSIALKMLDEINEIWLFDVGEATQHQILRTNIRLRKVTKIF
ISHNHGDHIFGLPGLLATRSFQGDVGPITIYGPAGLEEFVRTALKVSRTKISYPIKFMVL
EEGGLIFQGNGFRVYAEKLAHRVPSFGYRVVEDNRPGELLMDKLAQYNVPNGPLLGKLKN
GEKITLDNGTILDGKDFLGPNKAGRVVTIIYDTRATPAIAQLAQNADVLVHESTFAGNEA
NLAHSYYHSTAVEAAKIARDNGVKRLFLNHISARYLGAKAKKLENQAQKIFPNTRLANDF
DRIVIPMKGEKNE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggagttacaatttttaggaactggagcaggacaaccgtctaagaaacgcaacgtatca
agtattgcgttaaaaatgctcgatgaaattaatgagatttggttatttgatgttggtgaa
gctacccaacatcaaattttgcgtacgaatatcagactacgcaaagtaaccaaaatattt
atttctcataatcatggtgatcatattttcggattgccgggattacttgcgaccagatct
tttcaaggagatgttggtccaatcacaatttacggtccggctggattagaagagtttgtt
agaacagccttaaaagtttcacgcactaaaattagttatccgatcaaatttatggtttta
gaagaaggaggactcatttttcaaggtaacggttttagggtatatgcggaaaagttagct
caccgcgttcctagttttggttatcgagttgtcgaagataatcgaccgggtgaactttta
atggataaattagcgcaatataatgtacctaacggaccattacttggtaaactaaagaat
ggtgaaaaaattaccctagataatggtactatattagatggtaaggactttttaggacct
aataaggcgggtagagtagtgacaattatttatgatactcgtgctacaccggcaattgcc
cagttggcgcaaaatgctgatgtgctggttcacgaatcaactttcgctggcaatgaagca
aatttagctcattcatattatcactccactgctgttgaagcagcaaaaattgcgcgtgac
aatggtgttaaacgtttgtttttaaaccacatctctgctagatatttaggtgctaaagcc
aaaaaattagaaaaccaagcccagaagatttttccaaacactaggttggctaatgatttt
gatcgaattgtaattccgatgaaaggtgagaaaaatgagtga
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