Lactobacillus helsingborgensis: DLD54_04175
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Entry
DLD54_04175 CDS
T06906
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lhs
Lactobacillus helsingborgensis
Pathway
lhs03030
DNA replication
lhs03430
Mismatch repair
lhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLD54_04175
03430 Mismatch repair
DLD54_04175
03440 Homologous recombination
DLD54_04175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhs03032
]
DLD54_04175
03400 DNA repair and recombination proteins [BR:
lhs03400
]
DLD54_04175
Enzymes [BR:
lhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLD54_04175
DNA replication proteins [BR:
lhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DLD54_04175
DNA repair and recombination proteins [BR:
lhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DLD54_04175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWN33402
LinkDB
All DBs
Position
875777..878905
Genome browser
AA seq
1042 aa
AA seq
DB search
MKYAALQNLSAFTLLESPIKIKNLLNTAKNLGYDAVGLTDINVTYGLVNFYEVAQEVGIK
PLLGMQLRLNGLIDSAHKYDLIAFAKTDEGYRNILRLSSRINLLTENGTNDKILTLENLT
KDLNELIFITPANTHSELLNLQLQNENLGTDFIRHLISLVPKTSSLYLGVYGSNSQKNYI
QYVTQIAKQFDLPLVSVEDTCYLKPQDQFLRKTLQAIKKGAVMQDISELAKQKGSHYLPS
VQEISDRYHELNLDDALNNTGKIADACTAKVVFQTPVLPKYKQDQFANSKDYLNSLAQQG
LQDRFHGHKIPLNYQKQLDYELQVIDQMGFNDYFLIVWDVVNYCHRSDIVMGPGRGSACG
SLVSYSLRITEVDPIQYKLLFERFLNPARHEMPDIDLDIPDNRRDDVIKYMFTKYGMDHA
AQILTFGTLSAKQVLRDTGRVFGLQEMQMSKWSNSVPFSKGKITLQEAYQGSKKMQMLVN
ASAQNKLLFETANGLEGLPRHYSIHAAGLVLSDNSIAAIAGLQSGQLGIPITQQTKKYVE
SLGLLKIDFLGLRNLTILGDTEKLIRTQGKKIDFNKIPLNDPQTLAIFQKGETELVFQFE
SSGIRNVLRELHPDNFEDLVAVNALYRPGPMQNIKTFIARKKGKQKVAYPDPSLKPILAS
TYGVLVYQEQVMQTAQVLAGFSLGEADILRRAMSKKDQSVIEKEKSRFISGAVKKGKTKQ
VAAKVYNYIEQFANYGFNRSHAVAYTMIAFWLAYLQVHYPAEFYAAMLNSNTGNQNKLIE
YVMKAQGDGVKILSPDINRSTLNYQVIDGKILVSLRAIKGIKIDFLKEIIKKRQNGKFKS
LSDFLRKIDPKFIQTKVIQSMIKAGCFDQLNSNRNELLQNSTEIVENVKLTQGNLALAES
LGGAPIEPAKAPTKQEKARMEEEALGFSTLTSPLLAVQKYAQKFNARPLSDFEIHESGIT
VGKLLNLKLIRTKNERTMAFGSFADSSSKQDIVIFPNVYDKIQSNLKEGGIYLLGIKIQN
DRIDSSKKQYVLTNLKVVNFKE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgctgctctgcaaaatcttagtgctttcacgcttttagaaagtcctataaag
atcaaaaacttattgaataccgctaaaaatttaggctatgatgccgtagggctaacggat
attaatgtcacatacggtctagttaacttttacgaagtagcacaagaggttggtattaag
ccgcttttagggatgcagttgagacttaatggactaattgatagtgcgcataaatatgat
ttaatagcatttgctaaaacagatgaaggctaccgcaatattttacgattatcaagtagg
atcaatctgctaactgaaaatggtactaatgacaaaatcctgactctagaaaacttaact
aaagatttaaatgaactgatttttatcacacctgcaaatacacatagtgagttacttaat
ttgcagctgcagaatgaaaacttgggcactgatttcatccggcatttaattagtttggtg
ccaaagaccagttcattatatttaggcgtttacggcagcaattcacaaaaaaattatatt
caatacgtcacgcagattgctaagcagtttgacttaccccttgttagtgttgaagacaca
tgctacttgaaaccgcaggatcaatttttgcgcaaaactttgcaagctattaaaaaaggc
gctgtaatgcaggatatttctgagttggcaaaacaaaaaggctcacattacttaccttca
gttcaggagataagtgaccgctatcatgagcttaatttggatgatgctctaaataatacg
ggcaaaatcgctgatgcttgtactgccaaagtggtttttcaaacacctgttttgccaaaa
tacaaacaggatcagtttgctaactcaaaggattatcttaattctttagctcaacaaggt
ttgcaggaccgttttcatgggcataaaataccgctaaactatcaaaaacagctggactac
gagttgcaggttattgaccaaatgggctttaacgattactttttaatagtttgggatgtg
gtaaattattgccaccgctccgatatagtcatgggaccgggacgcggctctgcctgtggc
tccttagtttcatattcactgcgcatcacggaagttgaccctatacaatataaattattg
tttgaacggtttttaaatccagcaagacacgaaatgccagatattgatttagacatacct
gataatcgcagagacgatgtcatcaaatacatgttcactaaatacggtatggaccatgcg
gcacaaattcttaccttcggtactctgtccgctaaacaagttttgcgggatacgggacgc
gtttttggcttgcaagaaatgcaaatgagcaaatggtcaaacagcgtacctttttctaaa
ggtaaaatcactttgcaagaagcatatcagggatcaaagaaaatgcaaatgctagtgaat
gccagtgcgcaaaataagctgctctttgaaacggcaaatggtttggaaggattaccgcgg
cactattctattcacgcagccggtctagtccttagtgataattctattgctgcgattgct
ggattacaatctggtcagttgggcatacctatcactcagcaaacaaagaaatatgtcgaa
tctctgggattattaaaaatagattttttaggtctcagaaatcttacaattttaggggat
acggaaaaattaatacgaacacaaggtaaaaaaatcgattttaataaaatacctttaaat
gatccccaaaccttagcaattttccaaaaaggggaaaccgagctggtttttcagtttgaa
tcaagcgggatcagaaacgtgttgcgtgaattgcatcctgacaactttgaagatttggtc
gctgttaacgctctttacaggccaggtccaatgcaaaatatcaagacttttatagccaga
aaaaagggcaagcagaaagtagcgtatccagatccaagtttaaaaccaattttggcttca
acctatggcgttttagtgtaccaagagcaagtaatgcaaacagctcaagttttagcaggt
ttttctttaggtgaagccgatatcttgagacgtgcaatgtcaaaaaaggaccaaagcgtt
attgagaaagaaaaatcgcgctttatttccggtgctgtcaaaaaaggcaaaactaaacaa
gtagcggccaaggtttataactatattgagcaatttgcaaattatggcttcaaccgctcc
catgccgtagcctacactatgattgctttttggttagcatatttgcaagttcattatcct
gctgaattttatgcggccatgcttaattcaaatactggtaaccaaaataagttaattgaa
tatgtgatgaaggcacaaggtgacggggtaaaaattctgtctcctgatattaacagaagt
accttaaattatcaggtgattgacggtaaaattttagtcagtttgcgggcaattaagggt
atcaagattgattttctgaaggaaataatcaagaaaagacagaatggcaaatttaagtct
ttgagtgattttttgcgaaaaattgatcccaagttcattcaaaccaaggtaatacaatca
atgattaaggctggctgttttgatcaacttaactctaatagaaatgagttattacaaaat
agtactgaaatagttgaaaacgtcaagttaacgcagggaaatctcgcacttgctgaaagc
ttaggcggagcacctattgagccggctaaagcaccaactaaacaggaaaaagcccgcatg
gaagaagaagccctgggtttttccactttaacttcgccattattagcggtacaaaaatat
gcgcaaaaatttaatgccagacctttaagtgattttgaaatccatgagtcaggcataacg
gtggggaagctgttaaatttaaaactaattagaaccaaaaatgagcgaaccatggcgttt
ggcagctttgcggattcaagcagtaagcaggatattgttatttttcctaatgtttatgat
aaaattcaatcgaatttaaaggaaggtggaatttacttattaggtattaaaatacagaat
gaccgtattgattccagtaaaaaacagtatgtattgacaaatttaaaggttgtcaacttc
aaagagtga
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