Lactobacillus helsingborgensis: DLD54_05085
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Entry
DLD54_05085 CDS
T06906
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhs
Lactobacillus helsingborgensis
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhs03016
]
DLD54_05085
Enzymes [BR:
lhs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DLD54_05085
Transfer RNA biogenesis [BR:
lhs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DLD54_05085
Prokaryotic type
DLD54_05085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
NADAR-DarT1
SBB_T7
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AWN33569
LinkDB
All DBs
Position
complement(1074045..1074938)
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AA seq
297 aa
AA seq
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MINGILVIDKDQGMTSADVVYHLRKVLHIKKIGHAGTLDPDVTGVLPIAIGQATKLIELM
HRQNKKYVGQGILGFSTDSCDTSGKILSSQKLTQKIAATEIKKAMQEFTGEIEQVPPIYS
AVRVNGKHLYEYARAGISVERPKRKVHITNYELEQEPFFDDEKGQETFSFQIECSKGTYV
RSLVNDLGTKLGVPAVMKTLRRTASSGFDLEQAVKLSTIIEHPERVTEFIQPLDAFFKDY
SHSDLSETDWTKVKNGAAISLKTNAKKVALRYNNSVKAIYQKDGTMYRPYLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgataaacggtattttagtgatagataaagatcagggcatgacgagtgcagatgttgtc
tatcatttacgcaaggtgttgcacattaaaaaaattggtcatgctgggactcttgatcca
gatgttacaggcgtattgcctattgcaattggtcaggctacaaaattgattgaactaatg
catcgacaaaataaaaaatatgttgggcaaggaattctaggcttttctactgatagttgt
gacactagtgggaaaatattaagctctcagaaactcactcaaaaaattgcggcaactgaa
attaaaaaagcaatgcaggaatttaccggagaaatcgagcaagtgccgccaatctactct
gcggtgagagtgaatgggaaacatctctatgaatatgccagagccggcataagtgttgag
cgacctaagagaaaagtgcatatcactaattatgaacttgaacaggaaccattttttgat
gacgaaaaaggtcaagaaacttttagttttcaaatagaatgtagtaagggtacgtatgta
aggtcattagttaatgatctgggaactaagctgggtgtaccagcagtgatgaagacttta
aggcgtacagcaagttcgggttttgatttggagcaggcagttaaattgtctacaataatt
gagcatcctgaacgcgtcactgaatttattcagccattagatgcttttttcaaggactat
agtcactctgatctcagtgaaacggattggactaaggtcaaaaatggcgctgctatttcc
ttgaaaacgaatgcaaaaaaggtggcattacggtacaataatagcgttaaggcaatttat
cagaaagatggtaccatgtatcgcccttatttaatgcttttacaaaatgaataa
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