KEGG   Lactobacillus helsingborgensis: DLD54_05260
Entry
DLD54_05260       CDS       T06906                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lhs  Lactobacillus helsingborgensis
Pathway
lhs02024  Quorum sensing
lhs03060  Protein export
lhs03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lhs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    DLD54_05260
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DLD54_05260
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DLD54_05260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lhs02044]
    DLD54_05260
Enzymes [BR:lhs01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     DLD54_05260
Secretion system [BR:lhs02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   DLD54_05260
  Eukaryotic Sec-SRP protein
   DLD54_05260
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin AAA_17 AAA_33 cobW CbiA 6PF2K AAA_28 AAA_18 AAA_24 MMR_HSR1 AAA_16 Helicase_RecD AAA_19 AAA hnRNP_Q_AcD AAA_30 DO-GTPase1 AAA_5 Lyase_catalyt APS_kinase ResIII DUF929 nSTAND3
Other DBs
NCBI-ProteinID: AWN33604
LinkDB
Position
complement(1108751..1110178)
AA seq 475 aa
MAFENLSERIQKALKNLTGKGKISEDDIDSASREIRLALLEADVNFKVVKDFIKKIKQEA
LGKEVQESLNPGQQVIKIVNDELTKMMGDSAVTLNKSKHIPTVIMMVGLQGTGKTTTVGK
LANLLMQKEKARPLLIAGDIYRPAAIDQLQQIGDQLKVPVYSEKDQKDVAQIVQNGLRQA
ETNKNDYVIIDTAGRLEIDEPLMAELEQVKKVAQPDNILLVVDAMTGQAATDVARGFDSR
LDITGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEQFYPDRMASRILGMGD
MLTLIEKAQQDYDAKKAEEVAEKMKENTFDFNDFVDQLEQVEKMGPLDQLMKMIPGMANN
PQLKNVNFDKKQIVYVKAIISSMTKEERENPELLNPSRRRRIAAGSGRPVVEVNRMIKQF
KQARDMMSKITKGNFKGMDNLPGMNSPMGRMAMRHMGKKFKKNKKKRMKVKRYHS
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggcatttgaaaatttaagtgagaggattcaaaaggccttaaaaaatttaaccggtaaa
ggaaaaatatcagaggatgatatcgatagtgccagtcgtgaaataagacttgccttgctt
gaagccgacgtcaattttaaagttgtaaaagactttattaagaaaattaagcaggaagca
ctaggaaaagaagtccaagaaagtcttaatcccggtcaacaggttattaaaattgtcaat
gatgaattgactaagatgatgggtgatagtgccgtaactttaaataagtctaagcacatt
ccaaccgtaattatgatggtgggacttcaaggtactggtaaaacaactactgttggcaag
ctcgctaacctattaatgcaaaaagaaaaagcccgccctttattaatcgcaggcgatatt
taccgtcctgctgctattgaccagttgcagcaaattggcgaccaattaaaagttccggtt
tatagcgaaaaggaccaaaaagatgtggctcaaattgtccaaaacggtttgcgtcaagct
gaaacaaacaaaaatgattatgtcattatcgatacggccggtcgtctggaaatcgatgaa
ccgctaatggcagaacttgagcaagttaaaaaggtggcgcagccagataacattttattg
gtagtagatgccatgacgggtcaagctgcaactgatgttgccagaggatttgatagccgc
ttagatatcactggtgtcattttaactaaacttgatggtgatacccgtggtggtgctgct
ctatcaattagggcagtgacaggcaaaccaatcatttatactgggcagggtgaaaaacta
acagatttagaacagttctaccctgaccgcatggcatcaagaatcttgggcatgggtgac
atgctgactttgattgaaaaagctcaacaagattatgatgccaaaaaggctgaagaagtt
gctgaaaagatgaaggaaaatactttcgatttcaacgactttgtcgatcaactggaacaa
gttgaaaaaatgggccctcttgatcaattaatgaagatgattcctggaatggctaacaat
ccgcaacttaaaaatgtcaattttgataaaaaacagattgtttatgttaaagccattatt
tcttctatgacaaaagaagaacgtgagaaccctgaattacttaaccctagccgtagaaga
agaattgcagcaggttctggacgaccggtagttgaagtcaacagaatgattaagcaattt
aaacaggcccgcgatatgatgagcaaaattaccaagggtaattttaaaggaatggacaat
ttaccgggaatgaattctcctatgggacgaatggctatgcgtcacatggggaagaaattt
aagaagaataagaaaaaacggatgaaggtcaagagatatcattcataa

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